Gene Nther_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0348 
Symbol 
ID6316170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp360510 
End bp361439 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content34% 
IMG OID642642733 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_001916533 
Protein GI188584988 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0150113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACCTA TTGAATTAAC ATCGGATAAA ATTGGTTATG TACTGGTTTT TTTAGGTGCT 
TCAATGTGGG GAACCACAGG CACTATCGGA AATCCCATCT TTGAAACTAA TCTGGATACA
ATGCAAATTG TCAGTGCCCA GACTAGTATA GCCGCTTCCA CCTTGATTGT TTATCTATTT
ATCACTAAAC CAGGTTTATT AAAAATCAAG TTCTCTCACA TACCCTTTTT TATTATGTTT
GGCTTAATAA CTCAAGTGAT CTATGCCTAT AGCTATTTCA ATGCAATTAG ATATATCGGA
ACTACCGGTG CAGTTATTTT ATCGTTCACA GCACCTATTT TCGTCTGCCT ATATTCAAGA
TGTTTTTTAG ATGAAAAACT AACTAAAGAA AAGATCTTGG GACTCACTTT TTCTATAATA
GGATGTTTTC TAACAGTTGG TGGATTTAAT ATAGATCAAT ATGACATAAC TCCCTTGGGC
ATAGCTTTTG GTTTAATGAC AGGTCTATCC TTTGCTTCAT ATACTGTGAT GGGTAAAATA
GCCCTAAGTG ATTACTCTTC TTTAACTGTT ACTACTTATT CACTATTTTT TGGTGCTATA
ACCTTGAGTG TCTTTTACCC ACCGGTTGGT GGGTATCTAA GTGATTTTGA TACTACATTA
TGGTTAAGTA TATTAGGACT TGGTCTAATA CCAACTGTAT TAGCCTTCAT TTTTTACACT
AACGGACTTG ATAAAATAGA ATCAAGTAAA GCAAGTATCA TTTCAACTGC AGAAGTGATT
TCAGCTACCA TCTTAGCTTA TTTAGTACTA GGAGAGGAAT TTACACCTTT AAGAGTGATA
GGTATTTTTA TGGTAATTAT AGGTGTTATC GTTACTAGAA CCAGTTCAAC TAGTTCTTTA
AAAGAACTGG TCTCTAAACC TACTCGGTAG
 
Protein sequence
MRPIELTSDK IGYVLVFLGA SMWGTTGTIG NPIFETNLDT MQIVSAQTSI AASTLIVYLF 
ITKPGLLKIK FSHIPFFIMF GLITQVIYAY SYFNAIRYIG TTGAVILSFT APIFVCLYSR
CFLDEKLTKE KILGLTFSII GCFLTVGGFN IDQYDITPLG IAFGLMTGLS FASYTVMGKI
ALSDYSSLTV TTYSLFFGAI TLSVFYPPVG GYLSDFDTTL WLSILGLGLI PTVLAFIFYT
NGLDKIESSK ASIISTAEVI SATILAYLVL GEEFTPLRVI GIFMVIIGVI VTRTSSTSSL
KELVSKPTR