| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0257 |
|---|
| Symbol | |
|---|
| ID | 6316041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 271802 |
|---|
| End bp | 272362 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642642640 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_001916444 |
|---|
| Protein GI | 188584899 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02954] RNA polymerase sigma-70 factor, TIGR02954 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.0811664 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATAGCAG CAAAGGGGGT TCAAACAAAA TTGACAACTG AAATACAAGT TCAAAAAGCA
GTTAAAGGAG ATGAAGATAG TTTTGTAAAC CTGATACAGT CGAGAAAGGA AAAAATGTAT
CGGATAGCAT TTTCATATGT GAAAAACAAA GAAGATGCTC TAGATGTAGT CCAGGAAGTA
ACATATAAGG TGTACATTTC AATAGATAAA CTAAAGCAGC CAGAGTACTT CGATACTTGG
CTTGTTAAAA TAACTATCAA CACTGCAGTA AATTATATTA AATCAAATAA TAAGTACGTC
TACATGGAGG CGAACAAGGA AGTAAGAGAT AGTCGATATA ATAAAGATGA GATAGTTGAG
ATGATGGACT TAAATAATGC TTTGGATAAT TTAGAGCAAA AAAACAAAGA AATTATAATA
TTAAAAAGTT TTGAAGATCT CAAGTTCAAG GAAATATCAG AAATATTAGG TTATCCATTA
AATACTGTTA AAACAAACTT TTATAGAGGT TTAAAGAAAA TTAAAGATAA TTTGGAAGGA
GGTTATAATA GTGAAGGTTA A
|
|---|
| Protein sequence | MIAAKGVQTK LTTEIQVQKA VKGDEDSFVN LIQSRKEKMY RIAFSYVKNK EDALDVVQEV
TYKVYISIDK LKQPEYFDTW LVKITINTAV NYIKSNNKYV YMEANKEVRD SRYNKDEIVE
MMDLNNALDN LEQKNKEIII LKSFEDLKFK EISEILGYPL NTVKTNFYRG LKKIKDNLEG
GYNSEG
|
|---|
| |