Gene Nther_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0222 
Symbol 
ID6315969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp233365 
End bp233994 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content40% 
IMG OID642642605 
ProductSSU ribosomal protein S4P 
Protein accessionYP_001916409 
Protein GI188584864 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01017] ribosomal protein S4, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.745829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTT ACCAAGGCCC TGTATGTAGG TTATGTAGGC GAGAGGGCAC CAAGTTATTT 
TTAAAAGGCG AAAGGTGCTA TACTGATAAA TGTGCAATAG ATAAAAAGGC TTATGCACCA
GGCCAGCACG GTCCTACTAG AAGGAGCAAA CAAAGTGAAT ACGGTATGCA GCTGAGAGAA
AAGCAAAAAG CTCGTCGAAT TTATGGAGTC CTTGAAAATC AATTTAGAAG ATATTTCAGG
GAAGCAGATA GGAAAAAAGG TATTACCGGA CAAACTTTGT TAAGACTATT AGAAACCAGG
TTAGATAATG TTGTTTATCG AATGGGTTTT GCAGCTAGTA GAGCGGAAGC AAGACAGTTT
GTAAACCATG GTCATATTAT GGTCAATGGC AAAAGAGTTA ATGTAGCTTC TTATGAAGTT
AAACCTGGTG ATGAGGTAGT TGTTAGGGAA AAAAGTCGAG ATATTCCAAG AGTACAAGAG
CTAAAAGAGC TTGCTGAAGG TTATCGTGTG CCTGAATGGT TAGAGGCAGA TCATGAAAAC
TTTACTGGTC GAGTAGTAAG GTATCCAGAA CGAGAAGAAA TAGACGTACC TGTGGAAGAG
CATCTAATTG TTGAGCTTTA TTCCCGTTAA
 
Protein sequence
MARYQGPVCR LCRREGTKLF LKGERCYTDK CAIDKKAYAP GQHGPTRRSK QSEYGMQLRE 
KQKARRIYGV LENQFRRYFR EADRKKGITG QTLLRLLETR LDNVVYRMGF AASRAEARQF
VNHGHIMVNG KRVNVASYEV KPGDEVVVRE KSRDIPRVQE LKELAEGYRV PEWLEADHEN
FTGRVVRYPE REEIDVPVEE HLIVELYSR