| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0175 |
|---|
| Symbol | |
|---|
| ID | 6315067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 198860 |
|---|
| End bp | 199372 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642642553 |
|---|
| Product | protein of unknown function DUF901 |
|---|
| Protein accession | YP_001916362 |
|---|
| Protein GI | 188584817 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3688] Predicted RNA-binding protein containing a PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000000640725 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATT ATTTAATTGT AGACGGTTAT AATATTATTA ATGCTTGGGA CCATTTAAAA
AAATCTGCCG AAGAAAATTT AGAAATTAGT CGAATTGAAC TAATAGACGA ATTATCCGAG
TACAAAGGGA TTTTGTGGGG AAAGATCGTT GTGGTTTTCG ATGCCCACTC AGCCAAGCAA
AAAAACCGCC ATACTGAACA AATCAATGGA ATTTTGGTTA TATACACTAA GGAAGGGGAA
ACGGCTGATA GTTTGATTGA GGCTTTAGTG TATGATTTGG TCGATAAAGG CAATGTTGAT
GTAGCCACCT CCGACTGGCA AGAACAACGT GTAATTATGG GGAAAGGTGC TGTCCGACTT
TCGGCTCGTG ATTTAAAAAA GCTCATTAGG GAGACTAAGG AAAAAATACG TAAAAATTTC
ATTGAAAAAG AAGAAGGTAA ACGAAATACT CTCGATAATC TCCTCGATCA GCAAGTTAAA
GAGAAACTCA ATATTCTTCG ACATAAAAAG TGA
|
|---|
| Protein sequence | MTDYLIVDGY NIINAWDHLK KSAEENLEIS RIELIDELSE YKGILWGKIV VVFDAHSAKQ
KNRHTEQING ILVIYTKEGE TADSLIEALV YDLVDKGNVD VATSDWQEQR VIMGKGAVRL
SARDLKKLIR ETKEKIRKNF IEKEEGKRNT LDNLLDQQVK EKLNILRHKK
|
|---|
| |