Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0158 |
Symbol | |
ID | 6314732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 182158 |
End bp | 183528 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642642536 |
Product | DNA repair protein RadA |
Protein accession | YP_001916345 |
Protein GI | 188584800 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00234882 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAAAAAT CGACAATATA TTACATGTGT TTAGACTGTG GACATACGGA ATTAAAGTGG TTAGGTAAGT GTCCTGCATG TTCTAATTGG AATACATTTC AAAAAAAATA TCAACAACCG AGCGATAATA AGCATAAATC TAACATTGGT TCATCTGAAT CAGAACAATC TTCTCAAGTA ATCACCTTGT CAGAGATTGA CTTAGAAAAA GAACCTCGTA TGAGTACAAG CATCGATGAA CTTGATAGAG TTTTAGGTGG AGGTATTGTA CCTGGCTCAG TAGTTCTCTT TGGAGGAGAC CCTGGGATAG GTAAAAGTAC CCTGATGTTG CAAGCCTCTC ATAATTTGGA TACATTAAAT TTCAGTACCC TTTATGTTTC TGGTGAAGAA TCACTGTCTC AATTAAAACT AAGATGTGAA AGACTAGGAC TAAACTCTGA ATCCTTATTG TTTGCTTCTA TCACAGACCT CAGGGAACTA GAAAATAGAT TAAATGAACA AAAACCACAA ATATTAATAA TTGATTCTAT TCAATCATTA TATACTCCTG AAATTGAAGC CCCGCCTGGA AGTTTATCCC AAGTTAAGCA CTGTGCAGCA GTTTTACACT CAGTTGCTAA AGAAAATGAA ATTGCTTGTT TGATAGTTGG GCATGTTACT AAGGCAGGCC AAATAGCCGG CCCTAAAGTT TTAGAACATA TAGTAGATAC TGTTTTATAC TTTGAGGGAG ATCATCATCA AGACTATAGG ATATTGAGAA GCATAAAAAA TAGATTCGGC CCCATAGAAA TTGGTGTTTT TGAAATGCGT CAAACTGGAT TACAGGAAAT TACTAACCCG TCCAAATTGT TTTTAAGGAA AAGACCAGAC TACACCGTAG GTTCTGCTAT CTTACCCAGT TTAGAAGGAA CAAGGGCCTT TTTGGTAGAG ATTCAAGCTC TGGTCAGTAC CAGTCAACTA GGCACTCCCA GAAGAGTTGT CACAGGTATT GACAGTAACC GAGCAGCATT AATAACTGCC GTTTTAGAGA AAAAATCCGG TTTGCACTTA GTAGGTGACG ATATTTTTAT TAATGTGGTT GGTGGTGCTA AAGTAGCTGA ACCTGCAGCC GACTTGGCTG TGGCTCTAAG TTTGATCTCT AGCTTTAAAG AACAAGGGTT TCCGGGAGAT TTAGTTGTCA TGGGAGAAAT AGGTTTAACA GGTGAAATAC GATCATGTAA TCAACCAGAA AAACGCCTTT TAGAAGCAGA AAGAATGGGT TTTAAAAAAG CAATATTACC CGAAGCTTGC CGTTTAAATC ATCATCAAGG AAACATTGAG ATTTATCCGG TATCCTATTT GAAAGATGTT TTAGAAATAT TATCAGGGTA G
|
Protein sequence | MKKSTIYYMC LDCGHTELKW LGKCPACSNW NTFQKKYQQP SDNKHKSNIG SSESEQSSQV ITLSEIDLEK EPRMSTSIDE LDRVLGGGIV PGSVVLFGGD PGIGKSTLML QASHNLDTLN FSTLYVSGEE SLSQLKLRCE RLGLNSESLL FASITDLREL ENRLNEQKPQ ILIIDSIQSL YTPEIEAPPG SLSQVKHCAA VLHSVAKENE IACLIVGHVT KAGQIAGPKV LEHIVDTVLY FEGDHHQDYR ILRSIKNRFG PIEIGVFEMR QTGLQEITNP SKLFLRKRPD YTVGSAILPS LEGTRAFLVE IQALVSTSQL GTPRRVVTGI DSNRAALITA VLEKKSGLHL VGDDIFINVV GGAKVAEPAA DLAVALSLIS SFKEQGFPGD LVVMGEIGLT GEIRSCNQPE KRLLEAERMG FKKAILPEAC RLNHHQGNIE IYPVSYLKDV LEILSG
|
| |