| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0154 |
|---|
| Symbol | |
|---|
| ID | 6314728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 178376 |
|---|
| End bp | 179230 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642642532 |
|---|
| Product | apurinic endonuclease Apn1 |
|---|
| Protein accession | YP_001916341 |
|---|
| Protein GI | 188584796 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0648] Endonuclease IV |
|---|
| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.342426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTGG GTTTTCACAT GCCCCTTTCG GGTGGTGTGG GTAAACAATT AAATCGTGCT
AGTGAATTAG GTATGGAATG TATACAAATT TTTTCAGGGA ATCCAACTAG CTGGAAGCCA
GGCAAAATCA CACCAAAATC TCGAGATTTA TTTATAAAAA AACAGGAGGA ATTACAGATA
AAACCTTTAG TGTTTCATAC TCCCTACTTG ATTAACCTGG CTTCTCCTAA AAATGATATT
AGGGAAAAAT CAATCTACTT ATTGAATGCT GCCTTGGAAA AAGCCAAAGC TTACGATGCT
CCTTATGTGG TAACTCATAT CGGTAGTCAT GTGGGTGAAG GAGTTGAAAA GGGAATTGAT
CTGGTGAGTT ATAGTTTAGA AAAGATTATG GAGGATTGGC CTGAGGGGGT AGAATTACTA
CTGGAAAACA CTTCAGGAGC TGGATCTACT CTAGGTGGTA GTTTAACCGA ACTTAAAAAA
ATTATAGATA AATTTTCAGG AACCCAGGTG CTCGGGTGCT GTTTTGATAC TGCTCATGCT
TGGGGTGCCG GTTACGACAT TTCAAATGTC AAGGAGGTAG AGACCACTCT GGAACTGGTT
AATGAACAGC TGGGCCTGGA TTTGATCAAA GTTTGCCATG CCAATGATAC CAATGTCCCT
TTAGGATCTA CTAAAGATAG GCATCAACAT ATTGGTGAAG GTAATATCAC AGATGAGGGA
TTCGGTGCTT TGTTAACTCA TGATTCATTT ACACCAAAGG CAGTTATTAT GGAAACACCA
AAAAATGGTA CAGACTGTGA CCAAATAAAC TTACAACGAT TAAAAAAGGT GGTTGGCAGG
CATGAAGAAG AATGA
|
|---|
| Protein sequence | MRLGFHMPLS GGVGKQLNRA SELGMECIQI FSGNPTSWKP GKITPKSRDL FIKKQEELQI
KPLVFHTPYL INLASPKNDI REKSIYLLNA ALEKAKAYDA PYVVTHIGSH VGEGVEKGID
LVSYSLEKIM EDWPEGVELL LENTSGAGST LGGSLTELKK IIDKFSGTQV LGCCFDTAHA
WGAGYDISNV KEVETTLELV NEQLGLDLIK VCHANDTNVP LGSTKDRHQH IGEGNITDEG
FGALLTHDSF TPKAVIMETP KNGTDCDQIN LQRLKKVVGR HEEE
|
|---|
| |