| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0122 |
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| Symbol | |
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| ID | 6317174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 145566 |
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| End bp | 146708 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642642500 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001916309 |
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| Protein GI | 188584764 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATAACT GGATAAAAAA GGACCGCCAG TACATGGATC GGGCGCTGGA TTTAGCTTGG
AAAGGTTGGG GGAAAACTAA TCCTAATCCC CTAGTAGGTG CAGTACTAGT AAAGAACGAT
GATATAGTTG CCCAAGGTTA TCATGGTAGA TTAGGAGGGC CTCACGCAGA AGCTGTTGCT
TTAGAAAAAG CCGGTAGAGA AGCTTCGGGA ACGACAATGT ATGTTACCCT TGAACCTTGT
TGTCATTACG GGAAAACACC TCCATGCACA GATAAAATTA TTGAAGCTGG TGTTAAAAGG
GTTGTAATTG CTTCTCTAGA TCCACACGAA AAAATGGCAG GAAAAGGTGT TAAAAAATTA
AGGCAAGCAG GAATTAAAGT AGAAGTTGGA CTAAAAAAAG CTGAAGCTGA GAAGCAAAAT
GAAATATTCA GAAAATATAT AGTAACAGGT TTGCCTTATA TGATTGGCAA ATGGGGGATG
AGTTTAGATG GAAAGATTGC TACTCATACC GGTGATTCTC GTTGGATTAC ATCGGAAAAA
GCCAGATTTG ACACTCATCG ACTTAGGGCG AGAGTAGCGG CTATTATGGT GGGAATCGGA
ACTGTAAAAG CTGATGACCC TCTCCTAACA TGTAGGCATC CTAATTACCC TGGACAGCAC
CCAGTAAGAA TCGTTGTAGA TTCTCATCTC AGATTATCTT TACAAAGCAA AGTATTAGAA
AAAATTTCTG AGACTCCAAC TATTATAGCT ACCTCAGAAG AAATCAAGCA CAAATCAAAA
GAAATGGAAA TTGCTAAACA GATTGAAAAT TTAGGAGGAG AAGTACTTTA CTTGCCCCAA
ACTTCTACAG GAAAAGTGGA TATATTTGAA CTGGTGAAAC TTTTGGGTCA AAGAGGGCTA
GATAGCGTGC TTGTTGAAGG TGGAGAAACT CTTCATGGAT CTTTAATAGA AGCTAATTAC
TATGATAAGT ATATTGTTTA TCTCGGGAAC TTGGTAATTG GAGGTACTAA CTCACCTACA
CCGGTTGGTG GAAAAGGTTT TCAAGCGCTA AAAGACAGCG TGATGTTAAA TAATATGGAA
TATGAATATT TTGGTGATTC TATCAGGATT GAAGCGTATC CATTTCTAGA AAACCAAAGA
TGA
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| Protein sequence | MDNWIKKDRQ YMDRALDLAW KGWGKTNPNP LVGAVLVKND DIVAQGYHGR LGGPHAEAVA
LEKAGREASG TTMYVTLEPC CHYGKTPPCT DKIIEAGVKR VVIASLDPHE KMAGKGVKKL
RQAGIKVEVG LKKAEAEKQN EIFRKYIVTG LPYMIGKWGM SLDGKIATHT GDSRWITSEK
ARFDTHRLRA RVAAIMVGIG TVKADDPLLT CRHPNYPGQH PVRIVVDSHL RLSLQSKVLE
KISETPTIIA TSEEIKHKSK EMEIAKQIEN LGGEVLYLPQ TSTGKVDIFE LVKLLGQRGL
DSVLVEGGET LHGSLIEANY YDKYIVYLGN LVIGGTNSPT PVGGKGFQAL KDSVMLNNME
YEYFGDSIRI EAYPFLENQR
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