Gene Nther_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0100 
Symbol 
ID6316315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp115206 
End bp117887 
Gene Length2682 bp 
Protein Length893 aa 
Translation table11 
GC content40% 
IMG OID642642473 
Productformate dehydrogenase, alpha subunit 
Protein accessionYP_001916287 
Protein GI188584742 
COG category[R] General function prediction only 
COG ID[COG3383] Uncharacterized anaerobic dehydrogenase 
TIGRFAM ID[TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.02152e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.06048e-13 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTCTTG TAACTGTAAC CATTGATGGT CAAAGCATAC AAGTTCCCAA GACCTCTACT 
GTGCTGGATG CCTGTGAAAA ATTAGGAAAA GAAATTCCTA CCCTTTGTCA CCAAAAAGAT
CTGACTACAG TGGGTGCTTG CCGTTTGTGC GTTGTGGAAG TAGAAGGCGC TGGAAACTTT
CCAACGGCAT GTACTCTTCC TGTAAAAGAT GGCATGGTGA TCAATACAAA CACTGATGAA
GTAAGGCATG CACGAAAGAT GGTTTTGGAA TTATTATGGG CAAATCATCC AAATGATTGT
TTAACTTGTG AATCTAACGG AAACTGTAAG TTTCAAGATT ACTGTTATGA ATACGGGGTT
ACTGAAAGCA GATTTCGGGG AGAAGTTATC GAACATGAAA TAGATGAAAC TAGTCGCTTT
GTTGAAAGAG ACCTGGATAA ATGTATTTTG TGCGGGAAGT GTATTAGAGT TTGCCACGAG
ATTCAAGGAA GTGAAGCTAT TGATTTCATG GATAGAGGTT TTGAAACTAA AGTGGCAACA
TTTTATGATA AAGGACTTAG CGACTCCCCC TGTGTAGATT GCGGTAATTG TATAAATGTA
TGTCCAGTAG GTGCTTTGAT TCCAAAACCC TTGAAAGGTA AGGGAAGGGA TTACGATTTC
GAAAAAGTCA AGACAACCTG CCCATACTGT GGTGTCGGGT GTACTTTTAA TCTAAATGTC
AAAGATGGAG AGGTTGTTGG TGTCAGTCCT GATGAAGAGG CTGAAGTAAA CGATGGATAC
CTTTGCGTTA AAGGCCGCTT TGGAACAGGA TTTATCCATA ATGATGATAG ACTAACCCAA
CCTCTTGTTA GAAAAAATGG TGAACTTGTA GAAACTGATT GGGAAGAAGC CTTAAATACT
GTTGCGGAAA ACTTTAAAAA ACTAAAAGAA AAACACGGTG GCGACGCCTT TGGATTTTTA
GCTTCTGCAA AATGCACTAA TGAAGATAAT TACCTGTTTC AAAAATTTGC GAGAGCGGTA
GTAGGTACAA ATAATATTGA TCATTGTGCC CGCCTCTGAC ATGCTCCTAC AGTGGCCGGT
CTGGCCACAC AGTTTGGTAG TGGAGCAATG ACTAACAGTA TCGGAGAAAT AGAAGATACC
AGTACGATAT TTGCTATTGG AACTAATACT ACAGAAGCTC ATCCAATTAT CGCTCAAAAA
GTATTTAAAG CTCAAAATAA AGGGGCAAAA TTGATTGTCG CTGATCCAAG GAAGATAGAG
ATAGCTGAAA AAGCGGATAT ATGGTTGAGA CCTTTACCAG GAACCAATGT AGCTTTACTG
AATGGAATTA TGAAAGTTAT TTTGGAGAAA GATTTGGTCG ATAAAGAATT TATCCGAAAC
AATACTGAAG GTTTTGAAGA AGTTAAAAAA CAACTTGAAC AGGTGTCATT GGATGAAATT
GAACAGATAA CCCAAGTACC CAAGGACAAA ATTGAACAAG CTGCTATCAT GTATGGAGAA
AGCGATAAAG CTTCTACTCT GTACACTATG GGAATCACTC AGCACACCAC TGGAACCGAT
GCAGTTTCTT CAATTGCGAA CCTGGCATTG ATGACAGGCA ATGTCGGTCG AGAAAGTACT
GGTGTTAATC CATTGAGAGG TCAAAATAAT GTCCAGGGAG CCTGTGACTT GGGTGGATTA
CCCAATGTAT TAACTGGTTA TCAAAAAGTA GCAGATCCTG AAACAGTCTC CAAATTTTCT
CAAGAATGGG GACAGGAGCT AAATGATCAG CCGGGTATGG CTGTTACTGA AATGCTAAAA
GCAACTGGTG AAGATTTAAA AGCTATGTAT ATTATGGGTG AAAATCCTAT GGTCACAGAT
GCTAACTTAG GTCATGTGGA AGAAGCCCTT GATAGCTTGG ACTTTTTAGT TGTTCAAGAT
ATCTTCTTAA CAGAGACTGC AGAAAAAGCA GATGTAGTGT TACCAGCTAG TTCTTTTGCG
GAAAAGGATG GAACATTCAC TAATACTGAA CGACGTGTTC AAAGAGTTCG AAAGGCCATA
GAATCAGTGG GAGATAGTAA GCCAGACTGG CAAATCATAG CTGACTTATC TCAACAGATG
GGTTATGAAA TGAATTACAG CAATCCTCAA GAAATCATGG ATGAAATTAG GAAATTAACA
CCAAGCTATA GTGGTATTTC TTATGACAGA ATTGAAGATC AAGGGATTCA ATGGCCCTGT
CCATCTGAAG ACCATCCTGG TACTAAATAT CTTCATAAAG AAGGTAACTT TGCAATAGGC
AAAGGACAAT TTAAGGCCGT GGATTATCGA GAACCAGCTG AAACAGCAGA TGATGAATAT
CCATTTGTAC TGACTACAGG GCGAATGCTG TACCACTATC ATGCTACTAT GACCCGAAAG
GTCAGAGAAC TTAATGAAGA AGTCCCTGAA GGTGATATTG AAATAAACAC GCAAGATGCT
GAAAAATTAG GTATTGAAAA TGGTGACCAA GTAAAAGTCT CCTCCCGTAG AGGTGAAGTT
GTGACTGTTG CAGAGGTTAC TGATAGAGTG GCTCCAGGAG TTGTTTATAT GGATTTCCAC
TACAAAGAAG CAGCAGCTAA TAGGCTAACT AATGACGCCC TAGATCCTGC GGCTAAAACC
CCAGAACTAA AAGTCAGCGC CGTCAAAGTT GAAAAATCTT AA
 
Protein sequence
MSLVTVTIDG QSIQVPKTST VLDACEKLGK EIPTLCHQKD LTTVGACRLC VVEVEGAGNF 
PTACTLPVKD GMVINTNTDE VRHARKMVLE LLWANHPNDC LTCESNGNCK FQDYCYEYGV
TESRFRGEVI EHEIDETSRF VERDLDKCIL CGKCIRVCHE IQGSEAIDFM DRGFETKVAT
FYDKGLSDSP CVDCGNCINV CPVGALIPKP LKGKGRDYDF EKVKTTCPYC GVGCTFNLNV
KDGEVVGVSP DEEAEVNDGY LCVKGRFGTG FIHNDDRLTQ PLVRKNGELV ETDWEEALNT
VAENFKKLKE KHGGDAFGFL ASAKCTNEDN YLFQKFARAV VGTNNIDHCA RLUHAPTVAG
LATQFGSGAM TNSIGEIEDT STIFAIGTNT TEAHPIIAQK VFKAQNKGAK LIVADPRKIE
IAEKADIWLR PLPGTNVALL NGIMKVILEK DLVDKEFIRN NTEGFEEVKK QLEQVSLDEI
EQITQVPKDK IEQAAIMYGE SDKASTLYTM GITQHTTGTD AVSSIANLAL MTGNVGREST
GVNPLRGQNN VQGACDLGGL PNVLTGYQKV ADPETVSKFS QEWGQELNDQ PGMAVTEMLK
ATGEDLKAMY IMGENPMVTD ANLGHVEEAL DSLDFLVVQD IFLTETAEKA DVVLPASSFA
EKDGTFTNTE RRVQRVRKAI ESVGDSKPDW QIIADLSQQM GYEMNYSNPQ EIMDEIRKLT
PSYSGISYDR IEDQGIQWPC PSEDHPGTKY LHKEGNFAIG KGQFKAVDYR EPAETADDEY
PFVLTTGRML YHYHATMTRK VRELNEEVPE GDIEINTQDA EKLGIENGDQ VKVSSRRGEV
VTVAEVTDRV APGVVYMDFH YKEAAANRLT NDALDPAAKT PELKVSAVKV EKS