Gene Nther_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0078 
Symbol 
ID6316271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp92567 
End bp95068 
Gene Length2502 bp 
Protein Length833 aa 
Translation table11 
GC content34% 
IMG OID642642451 
Productstage II sporulation protein E, protein serine/threonine phosphatase 
Protein accessionYP_001916265 
Protein GI188584720 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID[TIGR02865] stage II sporulation protein E 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTTATG AAACTGAATA TATTAAAACT TATGAAAGAA CCTATAAACA AGCTTATCAA 
CCTTTAGATA CTTCTAAAAG TGCTACTCCA CGTACAAAAT TGTTGGTGAC TTTTTGGGAA
AAATTCCGTG AATTATTTAT TAAATTATTT AACGGTGTCA CAAGTTTATC AACTCTATAT
TTATTAACGG GTTTTTTACT TGGACGAGCT GAGGTTAGAG GTGGTCTAAT ACCATTGGTG
TTAGCATATT TACTAGCACT AAGGCTTGAA AAAGCCAGTT ATTTTTCGGC TGCATTTATT
GGGTCTCTAA TAGGTATCCA ATTGACCCAC GGGATAGAAG GAACTGTTAC TGTTATTATA
CCAGCAATGA TTTATTTACT GTGGGAAAGA AGAAGTCTTG GGAACAAACC AAAAATAGGA
ACTGTTATAT TCGTTGCTTC TTTTATGGTA ACTTCATGGT TTTACGGTGG ACTGCCTGGA
AGTTTTCCTT TTAACCTGCT ACCTTTAGCC ATAGAGGGTG GTTTATTGGT AATCTTTGCT
GTCTTGCTAA TGCCTGGTTT GCAATTTATT GAGTCAAAGA GGAAAACTGA TAACATTGAA
AAAGAAGAAA TAGTTAGCAT TATTTTGTTA GCATCCATGG CTTTTATGGG TTTACAAGGT
ATTATGATTG GCCCTTATTC AATTCCAAGA TTGGTGAGTT TATTAGCTGT GCTAATTGTT
GGATATAGGT ATGGCGGAGG ACAAGGTGCC GCGGCTGGCG CTATATTAGG CACTATAACT
AGTTTCTATA GTCTGTCCCA AATTAGCATT GGAGCGTTAA CTTTAAGCGG TCTATTGGCT
GGTATTTTTA AAGATTTTGG GAAGTTGAGC TCGACTTTTG CATTCATTTT TTCATCTGGG
TTAGTGGTAT TTTACCTTGG AGAGCCCTTT GTTATGCTGC ACTTTTTACA AGAAATTTTA
ATTATTTCTG TAATATTCTT AGTAATTCCT GAAAGATTTT TCTATAAAAT TACACCTTCT
CCAATCTCTC ATGGATCTAA AATGGTAAGT GATAGAAAGA TGGATCAAAT TATCAATCAT
AAATTTTATG AATTTGCTAG CTTATTCTCC GATATGGCTA AAGTATTTGA ACCTAATTCA
AATGAACAAG ATTATCATGA CAGTAGTGAA ATTGAAGATT TTGTCCAAAC TGTAGTCAAC
CAGGTTTGTG GTGGATGTTC CAAAGTATCT TATTGTTGGG AGAAAAACTT TTTTGTAACT
TATAAAAACT TTTTAAATGT GATAAGCAAG GTGGATAGTG GAAAAAAATT ACACAGAGAC
GAATTACCCG AATACTTACA AGAATCTTGT ATTAGACCGT CTTTACTATT GGAAAATGCT
GGCAGTGTAT TTGATGACTA TCAATTAGAG CATAATAAGG CTAAAAGTAG TGCAGCAGAA
AATAAAAAAT TATTATCTGA ACAAATGTTT GCACTATCAG AACTTTTTAA TAAAATGGCC
AAGTTTAAAG TTGTTGATTC CAGTAATAAC AGGGAATTAG AACAAGAAAT TAGATCGGCC
ATTGAAAACA AGAATTTTGT TTGTGAAGAA ATTTGTGTAA CAGGTAAGGT TCAAGAAGAT
TTAACTATAG AGCTAATAAT AAATTGTTCC GGGACTAAAC AAGAAGATAT TAAAGAAATA
TCAACATTAG TATCAGAGGT CGTAGGTGAA AAACTGTCAC CTGTAACTTG GGACCTATAT
CGTGAAGACT CCAAAATAAA TAACCATTAC TTTATAAGGT TAAGAGCAGA ACAACAGTTG
CAAGTTATTA CTGGTTGTAT CCAGATCAAT AAAGAAGGTG AACCTTTATC TGGAGATACT
TACATGTCAA GGGAGCTATC AACTGGAGAA CACTTGCTAT TATTAAGTGA TGGAATGGGG
TCTGGGTCTA AAGCTAACGA GGAAAGTGAA GCCACTGTTA ACTTAATTAC TAAATTACTA
AATTATGGTT ATGATAAACA AATGGTGATA AGGTCGGTTA ACTCGCTATT AGCTACTATC
AATCGAGTAG ATAGTTTTGC CACAGTAGAT ATGGCGTTAA TTGACTTGTA TACTGGTATT
GGGGAATTTT GCAAGGCGGG AGCTGTTTCT TCCTTTATTT CAACTGCTGA AGGGGTAGAA
AAGGTAGAAG CTTCCTCGTT ACCTGCTGGT ATCATAGAGT CAGTTGAACC TAAAAAAATG
ACATATAGTT TAAAACCAGG CGATTATTTA TATATGGTGA GTGATGGTGT CTTTGATATG
GGTGACGGTG AAAAATGGTT TGAGAAAGCA ATTTCTAATT TAAAATCAAA GGACCCCCAA
GAAATGGCAG AAGAACTCCT GGAAAAAGTG AAGCGCAGAT ATAGTTATGG AGACTTCCCT
GACGATGTAA CTATTTTAAT CGCTAAAATC ACAAGTAATT CTAAGGAATC TGAATTGGAC
TCTCAAACTA TGGGATTAGA TATATGGGAA AAGATAAATT AA
 
Protein sequence
MAYETEYIKT YERTYKQAYQ PLDTSKSATP RTKLLVTFWE KFRELFIKLF NGVTSLSTLY 
LLTGFLLGRA EVRGGLIPLV LAYLLALRLE KASYFSAAFI GSLIGIQLTH GIEGTVTVII
PAMIYLLWER RSLGNKPKIG TVIFVASFMV TSWFYGGLPG SFPFNLLPLA IEGGLLVIFA
VLLMPGLQFI ESKRKTDNIE KEEIVSIILL ASMAFMGLQG IMIGPYSIPR LVSLLAVLIV
GYRYGGGQGA AAGAILGTIT SFYSLSQISI GALTLSGLLA GIFKDFGKLS STFAFIFSSG
LVVFYLGEPF VMLHFLQEIL IISVIFLVIP ERFFYKITPS PISHGSKMVS DRKMDQIINH
KFYEFASLFS DMAKVFEPNS NEQDYHDSSE IEDFVQTVVN QVCGGCSKVS YCWEKNFFVT
YKNFLNVISK VDSGKKLHRD ELPEYLQESC IRPSLLLENA GSVFDDYQLE HNKAKSSAAE
NKKLLSEQMF ALSELFNKMA KFKVVDSSNN RELEQEIRSA IENKNFVCEE ICVTGKVQED
LTIELIINCS GTKQEDIKEI STLVSEVVGE KLSPVTWDLY REDSKINNHY FIRLRAEQQL
QVITGCIQIN KEGEPLSGDT YMSRELSTGE HLLLLSDGMG SGSKANEESE ATVNLITKLL
NYGYDKQMVI RSVNSLLATI NRVDSFATVD MALIDLYTGI GEFCKAGAVS SFISTAEGVE
KVEASSLPAG IIESVEPKKM TYSLKPGDYL YMVSDGVFDM GDGEKWFEKA ISNLKSKDPQ
EMAEELLEKV KRRYSYGDFP DDVTILIAKI TSNSKESELD SQTMGLDIWE KIN