Gene Nther_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0076 
Symbol 
ID6314897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp90085 
End bp91368 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content33% 
IMG OID642642448 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001916263 
Protein GI188584718 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.70582e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCTG TTTTTTTAAG GATTAATTCA TTATTTGGGG GGCCTTCATT GAAAAGTCAA 
AGGCCGTATT TCCAAAAAGG GAAGTACATA AATCAAATTG ATACTAACAG AATCCTGGAT
TCTTTATTTG ATGCAGTATT AGTTATTAAC CACTCTGGAG TAATAACTTA TATTAATAAA
GTTGTTGAAC AAGTGCTGAA AATTGAAGGC GAGACTTTGG TTGGATATGA TTACCGTGAA
CTTTTAAAGT ACAGTTACAC CTATGAGTTT GAAAATTTTT CAATTTTTGA AACTGCTTTA
TCAGAAAGGA AAGCAGTTCA TGATAAAGAG TTACACCTAA TTGATTCTGA GAATAATGAA
GTGATTATTA AGGGTAACAC TTATCCAATA TATGAAGGCG AAAATTTCTT AGGTGTTATA
GGTGTTTTCA GAGACATTAC ACGTGAAAAG GAATACCAGG AACAAACAAA AAGATGGGAA
GAAAAATTTA CTCAGGCAGA AAAGCTAGCT ATTGTAGGTG AAATGGCGGC GGGGACCGCT
CATGAAATAA AAAATCCTCT TGCTACAATC AAAGGGTTTT TACAATTGTT AGAAAGTAAT
GAGTTACCAG AATCTAAGAG AAAAGAATAT TTAGCTACTA TCACAGATGA AGTTAACAGA
ATGGAGCAAC TTGTAAAAGA GTTTTTGCAT CTATCTAAAC CTTCTAATCA AGAAGAACAT
GAAACAAATG AAACAGTGTC TTTGTGTAAA GTGTTCCAAA AGACTTTGAT TTTTTTTAGC
CCCCAATTTA AAAATAAAAA AGTTATGTTA AATATTAAAT GTCCAGGACA CCCTATATAT
CTACGGGGGA AATCTGATAA ATTACAACAA GTATTTATAA ATCTGATAAA AAATTCTTTG
GAAGCCATGG AAAAGATACC TCAGGATTGT AGGAAACTAA CCATCAAGGT GGATATTTAT
AAATCAAATA ATAAAGATGA TAAAAATGAA AAAGTGATCT TAGAATTTAT AGATACTGGC
CCAGGGATTC CCAAAAATAT TATGAATAAG CTGTTTTCCC CTTTTGCCAC TACTAAGGTT
AGAGGTACTG GCCTGGGATT GCCTGTCAGC ATACAAATTA TTCAGAATTT AGGAGGGTAT
CTAGTAGCAG AGAATAGCCC CTTGAGGGGT GCTTGTTTTC GTATTGAACT CCCTTTATAT
GATGTTGATG GAGTTAACAG TATATGTAGA AATGTTTATA TACCATATTG TGAAAGGGTG
GCTGATTATG ACAAACCAGA TTAA
 
Protein sequence
MRSVFLRINS LFGGPSLKSQ RPYFQKGKYI NQIDTNRILD SLFDAVLVIN HSGVITYINK 
VVEQVLKIEG ETLVGYDYRE LLKYSYTYEF ENFSIFETAL SERKAVHDKE LHLIDSENNE
VIIKGNTYPI YEGENFLGVI GVFRDITREK EYQEQTKRWE EKFTQAEKLA IVGEMAAGTA
HEIKNPLATI KGFLQLLESN ELPESKRKEY LATITDEVNR MEQLVKEFLH LSKPSNQEEH
ETNETVSLCK VFQKTLIFFS PQFKNKKVML NIKCPGHPIY LRGKSDKLQQ VFINLIKNSL
EAMEKIPQDC RKLTIKVDIY KSNNKDDKNE KVILEFIDTG PGIPKNIMNK LFSPFATTKV
RGTGLGLPVS IQIIQNLGGY LVAENSPLRG ACFRIELPLY DVDGVNSICR NVYIPYCERV
ADYDKPD