Gene Nther_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0068 
Symbol 
ID6317201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp84784 
End bp85338 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content39% 
IMG OID642642440 
Producttranscriptional regulator, AbrB family 
Protein accessionYP_001916255 
Protein GI188584710 
COG category[K] Transcription 
COG ID[COG2002] Regulators of stationary/sporulation gene expression 
TIGRFAM ID[TIGR01439] looped-hinge helix DNA binding domain, AbrB family
[TIGR02851] stage V sporulation protein T 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGCAA CCGGCATTGT TCGCAGAATA GATGATCTGG GCAGGGTAGT TATACCAAAA 
GAAATCAGAA GGACTTTGAG AATAAGAGAA GGTGATCCCC TGGAGATTTT CGTTGACCGA
GAAGGGGAAG TGATATTAAA AAAATATTCT CCAATAGGTG AATTGGGAGA ATTTGCAGAG
GAATATGTTG AATCAATTCA TGAAACTACC GGACATATAG CATGTATATC TGATCGAGAT
ATGATTATCT CAGTTGCTGG GACTGCAAAA AAAGAATTTT TAAATCGTCC ACTATCACCT
GCTGTGGATA GGGCTATGGA AGAGCGGCAA TCAGTGAAAA TTGAAGATTC AGCAGATCAT
CCCTACTATC AAGAAGCTGA AGATGAGCAG AGAAGTAGAT TTAAATCAGA AGTCATTGCC
CCTATAATTG CCCAGGGAGA TGCTATCGGT GCTGTAATAA TTGGTACTAA AGAAAAAGAT
TATACAATGA CAGATCAGGA ATTAAAAATT GCAGAAACCG CAGCAGGATT TTTAGCAAAA
CAAATGGAAC AGTAA
 
Protein sequence
MKATGIVRRI DDLGRVVIPK EIRRTLRIRE GDPLEIFVDR EGEVILKKYS PIGELGEFAE 
EYVESIHETT GHIACISDRD MIISVAGTAK KEFLNRPLSP AVDRAMEERQ SVKIEDSADH
PYYQEAEDEQ RSRFKSEVIA PIIAQGDAIG AVIIGTKEKD YTMTDQELKI AETAAGFLAK
QMEQ