Gene Nther_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0043 
Symbol 
ID6314252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp57085 
End bp59052 
Gene Length1968 bp 
Protein Length655 aa 
Translation table11 
GC content37% 
IMG OID642642415 
Productmethionyl-tRNA synthetase 
Protein accessionYP_001916230 
Protein GI188584685 
COG category[R] General function prediction only
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain
[TIGR00398] methionyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGGG ATAACACATT CTATATTACT ACCCCGATTT ACTATCCCAG TGATAAGTTA 
CATATTGGGC ACTCGTACAC TACAGTGGCT GCTGATTGTA TGGCTCGATA TAAAAAGTTA
ACGGGATATG ATGTTATGTT TTTGACTGGT ACCGATGAAC ACGGCCAAAA AATTGAACGA
AAAGCAAAAG AAAATGGGAA AAACCCCCAG CAATTTGTAG ATGAAATTGT AGCTAGCATT
AAAGAGCTGT GGACATTACT TGATATTGAA TATGATGATT TTATTAGAAC CACCGAGGAA
AGACACAAAT CTGTAGTCCA AAAAATATTT GAACGTTTTT ACGAGCAGGG AGATATTTAC
AAAGACCAGT ACGAAGGCTG GTACTGCACT CCTTGCGAAT CTTTTTGGCT GGAGAGACAG
CTTGATGAAG CTAAAACATG CCCGGATTGT GCTCGAGAAG TAGAATGGGT AAAAGAAGAG
AGTTACTTCT TTAAAATGAG TAAATATGCC GATCGCTTGT TAGAGCATAT TGAAAATAAT
CCAGAGTTTA TTCAACCCGA GTCACGGAAA AATGAGATGA TCAATAACTT TTTAAACCCT
GGTTTGGAGG ACTTATGCGT TTCTCGAACA ACCTTTAAAT GGGGTATTGA GGTCCCCATG
GATAAAGACC ATGTAGTATA CGTATGGTTA GATGCTCTGA CAAACTACTT AAGTGCATTA
GGATACTTAT CAGAAGATGA TACAAAATTT CAAAAGTATT GGCCATGCGA TGTACATTTG
ATGGCCAAGG AGATAGTTAG ATTCCATTCG ATTTATTGGC CTATTTTCCT TATGGCTTTA
GACCTTCCTT TACCTAAACA GGTATTTGGC CATGGCTGGC TTCTGTTGGA GGAAGGAAAA
ATGAGTAAAT CAAAGGGAAA TGTAGTAGAT CCTGAAGTTT TAGTTAATAA GTACGGTTCA
GATGCCATCA GATATTATTT GTTGCGAGAA ATATCTTTTG GATCTGATGG AGTGTTCACC
TTAGAAGCAT TAATTCGTAG AATAAATTAC GACTTAGCTA ATGATTTGGG TAATCTGTTA
AACAGAACCG TGGCCATGAT TGACAAATAC TTTGATGGTC AGATTCCAGA ACCAGTTGTT
TCAGAACAGG TGGATAATGA CTTGATTAAT CATGCACAAG AAACAGTGAC AGAGACAGAA
AAACACATGG AAGGCATGGA TTTCTCGGAA GCATTAAAAG CTCTATGGGA GCTAATAGGG
AGAACTAACA AGTATATCGA TGAAACACAA CCCTGGATTC TTGGAAAAGA TCCTAACAAA
AAAGATAGAT TAGCTACAGT ACTTTATAAT TTATCTGAAA GTTTACGATA TATTTCTGTA
TTGTTATCAC CTTTTATGCC CAGGACGCCA AAGCAAATAA GGAGTCAACT GGGAATAGAT
AATAACAAAG AAATCCAAAC TTATAAGTCT TTGTATGAGT GGGGCCAAAT TCCTTCTGGA
GTTAGGGTTT CTAAGGATAA ACCATTGTTT CCAAGATTGG AAATAGAAGA GGAATTAGAG
TCTTTCAATG ACAACAGTGA AGAACCACAA AAAGAAGAGA AAGAACAGGA TTCTCTGAAA
TATCCAGAAC TGAAAGAACA AGTAGATATT AAGGATTTTC AAAAACTTGA TTTAAGAGTA
GCTGAAATTG TCAATGTGGA GCCTATCAAA GGCGCAGACA AATTATGGAA GGTCAATGTA
GATTTAGGTT TTGAAAATAG ACAGGTAGTT GCGGGTATCA AGGAAAGTTT TGGTGCTGAA
GATTTGATTG GGAAAAAAGT TATCTTGGTG GCTAATTTAA AGCCGGCCAA AATAAAAGGA
GTTAAGTCCC AGGGAATGAT CCTAGCTGCC AATGATGAAG GTACAAATCA GTTGGAATTA
CCCAATTTTA TCTCAGACAA AATCACTAAA GGAAGTCAGG TGAGGTAA
 
Protein sequence
MARDNTFYIT TPIYYPSDKL HIGHSYTTVA ADCMARYKKL TGYDVMFLTG TDEHGQKIER 
KAKENGKNPQ QFVDEIVASI KELWTLLDIE YDDFIRTTEE RHKSVVQKIF ERFYEQGDIY
KDQYEGWYCT PCESFWLERQ LDEAKTCPDC AREVEWVKEE SYFFKMSKYA DRLLEHIENN
PEFIQPESRK NEMINNFLNP GLEDLCVSRT TFKWGIEVPM DKDHVVYVWL DALTNYLSAL
GYLSEDDTKF QKYWPCDVHL MAKEIVRFHS IYWPIFLMAL DLPLPKQVFG HGWLLLEEGK
MSKSKGNVVD PEVLVNKYGS DAIRYYLLRE ISFGSDGVFT LEALIRRINY DLANDLGNLL
NRTVAMIDKY FDGQIPEPVV SEQVDNDLIN HAQETVTETE KHMEGMDFSE ALKALWELIG
RTNKYIDETQ PWILGKDPNK KDRLATVLYN LSESLRYISV LLSPFMPRTP KQIRSQLGID
NNKEIQTYKS LYEWGQIPSG VRVSKDKPLF PRLEIEEELE SFNDNSEEPQ KEEKEQDSLK
YPELKEQVDI KDFQKLDLRV AEIVNVEPIK GADKLWKVNV DLGFENRQVV AGIKESFGAE
DLIGKKVILV ANLKPAKIKG VKSQGMILAA NDEGTNQLEL PNFISDKITK GSQVR