Gene Nther_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0013 
Symbol 
ID6314410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp22970 
End bp24238 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content36% 
IMG OID642642380 
Productseryl-tRNA synthetase 
Protein accessionYP_001916200 
Protein GI188584655 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.1419e-10 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGATG TCAAGTATAT TCGAAACAAT CCTGATGAGG CAAGGAAAGC TTGTGTCCAA 
AAAGGTGAAG ATGATCATGT TGATGAAATT TTGAAATATG ATGAACAGCG TAGGAAGATA
TTAACAGATT TAGAAGTATT AAAAAATAAG CGTAATACTG TTTCCAAAGA AATAGGTCAA
TTGAAAAAAG AGGGACACGA TGCACAAGAC AAAATTGCTG AAATGAAAGA GGTATCTGAT
AAAGTAAAAG AAATGGACGA TGAACTGAAA AAAGTTGATG AACAACTTAA TTATCATCTA
TTATGTATCC CTAATATACC TAATCCAGAT GTGCCTGTTG GGGACGATGA CGAAGATAAT
CAAGTAGTCA AGCAGGTTGG TGAACCAGTT AAAAAGGATT ACTTTAAACC TCATTGGGAG
GTGGCTGAAA ACCTGAACTT ACTTGATTTT AAGAGAGCTG GCAAAGTTAC TGGTACAAGA
TTTGTAAATT ATGTAGGTGA TGCTGCTCGT TTAGAAAGGG CCTTGATTGA TTTCATGATT
GATGTACATG TAACAGAACA TGGTTATGTA GAAATGATGC CTCCTTTTAT TGCCAATAGG
GACTCAATGA CTGGCACAGG GCAACTTCCT AAATTTGAAG ATGATATGTA TAAATTGGAA
GATATGGAAT ACTTTTTAAT TCCCACTGCT GAAGTTACTT TGACCAATTT GTATCGTGAC
GAGATTCTAC CTGGAGATTT TTTACCTAGA TATTTAGTCG CTTTTACACC ATGTTTTCGA
AAAGAAGCAG GTGCCCATGG ACGGGATACT CGAGGTCTTA TCAGACAGCA TCAATTCAAC
AAGGTAGAGA TGGTAAAATT TGTAGAACCA GAAAAATCAT ATCAAGAGCT TGATTCACTT
GTGGCAAATG CGGAAAGAGT GTTACAATTA TTAGAACTAC CTTATCAAAT ATCATTGATG
TGTACTGGTG ATTTAGGTTT TGCTGCAGCT AAAAAGTATG ACTTAGAGGT TTGGCTACCA
AGTTACGACA CTTACAGAGA AATATCATCA TGTAGTAATT TCGAAGATTT TCAAGCTAGG
AGAGCTAATA TAAGATATCG GCCAGAAGAA GGGGAAAAAG CCAGGTTTGT GCATACTTTA
AATGGATCTG GATTAGCTGT TGGAAGAACA CTAGCGGCTA TATTGGAAAA TTATCAAAAT
CCCGATGGAA CTGTTACAAT TCCTGAAGTG CTTAAGCCTT ACTTTAATGG TCGAGACGTG
ATTTCATAA
 
Protein sequence
MLDVKYIRNN PDEARKACVQ KGEDDHVDEI LKYDEQRRKI LTDLEVLKNK RNTVSKEIGQ 
LKKEGHDAQD KIAEMKEVSD KVKEMDDELK KVDEQLNYHL LCIPNIPNPD VPVGDDDEDN
QVVKQVGEPV KKDYFKPHWE VAENLNLLDF KRAGKVTGTR FVNYVGDAAR LERALIDFMI
DVHVTEHGYV EMMPPFIANR DSMTGTGQLP KFEDDMYKLE DMEYFLIPTA EVTLTNLYRD
EILPGDFLPR YLVAFTPCFR KEAGAHGRDT RGLIRQHQFN KVEMVKFVEP EKSYQELDSL
VANAERVLQL LELPYQISLM CTGDLGFAAA KKYDLEVWLP SYDTYREISS CSNFEDFQAR
RANIRYRPEE GEKARFVHTL NGSGLAVGRT LAAILENYQN PDGTVTIPEV LKPYFNGRDV
IS