Gene Nther_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0012 
Symbol 
ID6314409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp21504 
End bp22391 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content40% 
IMG OID642642379 
Productpyridoxal biosynthesis lyase PdxS 
Protein accessionYP_001916199 
Protein GI188584654 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0214] Pyridoxine biosynthesis enzyme 
TIGRFAM ID[TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0121717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATAG AAAAAGGTAC AGAAACAGTA AAAAAAGGTA TGGCCCAAAT GCAAAAAGGC 
GGAGTTATCA TGGATGTTAC AACTCCCGAA CAGGCTAAAA TAGCTGAAAA AGCAGGAGCT
GTAGCAGTGA TGGCTTTAGA AAAAGTGCCT GCAGATATAA GAGCTGGTGG TGGAGTAGCA
CGAATGGCAG ATCCTGAGGT TATTAAAAAG ATCATGGATG CTGTAAGTAT CCCAGTTATG
GCCAAGGCAC GAATTGGTCA TTTTGTGGAA GCTCGTATTT TGGAAAATTT AGGCGTTGAT
TATATAGACG AAAGTGAAGT GCTTACCCCA GCCGATGAAT ATTATCACAT TGATAAAAAC
AAATTCACTG TCCCTTTTGT ATGTGGTGCT AGGAATTTAG GAGAAGCCTT ACGCCGTGTT
GGAGAAGGCG CTTCTATGAT GAGAACTAAA GGGGAAGCAG GAACGGGTAA TGTGGTAGAG
GCTGTACGTC ATATAAGAAC TGTTATGGAT GGTATCAGAA AAGTTCAAAA TCTTCCTGAT
GATGAGTTAA TGACTGAAGC TAAGAATATT GGAGCACCTT ATGACCTTAT TAAACAAGTT
AAAGAAGAGG GAAGATTGCC TGTAGTTAAC TTCGCTGCTG GTGGAGTAGC TACACCTGCC
GATGCAGCTT TGATGATGCA ATTAGGTGCC GATGGAGTTT TTGTAGGTTC AGGTATATTT
AAATCAGGTG ATCCTGAAAA AAGAGCAAAA TCTATTGTAG AAGCAACATT AAATTACGAT
AATTATGATG TGTTGGCTGA TGTTTCTTCA GGATTGGGTG AAGCGATGGT AGGAATTAAT
GTATCCGATC TGGAAGAACA GGAAAGGATG CAAAATCGAG GCTGGTAA
 
Protein sequence
MNIEKGTETV KKGMAQMQKG GVIMDVTTPE QAKIAEKAGA VAVMALEKVP ADIRAGGGVA 
RMADPEVIKK IMDAVSIPVM AKARIGHFVE ARILENLGVD YIDESEVLTP ADEYYHIDKN
KFTVPFVCGA RNLGEALRRV GEGASMMRTK GEAGTGNVVE AVRHIRTVMD GIRKVQNLPD
DELMTEAKNI GAPYDLIKQV KEEGRLPVVN FAAGGVATPA DAALMMQLGA DGVFVGSGIF
KSGDPEKRAK SIVEATLNYD NYDVLADVSS GLGEAMVGIN VSDLEEQERM QNRGW