Gene Nther_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0005 
Symbol 
ID6315147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp4308 
End bp5210 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content31% 
IMG OID642642367 
Producthypothetical protein 
Protein accessionYP_001916192 
Protein GI188584647 
COG category[R] General function prediction only 
COG ID[COG5512] Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0643796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGGAA TCAGGAATGA TTTAAAAAAA TTCCTTGCTA AAAGTGGTTT ATTAAAGAAA 
TTTTATCAAG AAAAAGCTAT GAATTATTGG GTAGATGTCG TAGGTGAAGA AATTGCTACC
AATTGTCAAC CAAAAGTTTT TCAAGGTAAG AAAATGATAG TAGTATGTAG CAATTCTATT
TGGATTCAAG AATTGTCCAT GAGAAAGAAA AACTTAATTA AAAAACTCAA TGAAAAAGTA
GGTAAAACAG TAGTTACAGA TATTAAATTT GTTACGGGAC AGATCCCTAA TAATTCAGGT
TTAAATTTAA CTAGGGGACG ATCAAAATAT AAAGAAATTC CCTTGGAAAC CAAGGAAAAA
GATTGGGTTG AAAAAACTAC ATCGGAAATT GAAGACGAAA ATTTACAGAA AAAGTTAGCA
AAACTCATGG AGCAAGATTT AAAATATAAA AAAGGAAAAA AATCGCAAGG TTATTCTGAA
TGTGATAAAT GTGGGAAATT AACTAACAAT AAAGGTATTT GCCAAGATTG CATAGAAGAG
AACGAACGGA AAAAGTTGAA TACTTTAATA AGGATTTTGA AGGATTCCCC TTGGTTAAAT
TACAATGAAT TACAAGAAGA AATCCCTTCT GATATGGAGA TAACAAGAAG GGATTACAAT
CGAGCTAAAA ATCAATTTTA TCAACGTGTT AAAGATGAAC TGTTTAAAGC GAAACAAGTT
TTTAAATATA ATCAAACTCA AAAAAATTAC GATTGGCTTA AAGACCTTTT ACAGCAATAT
GTTTTGATTA TAACTGAAGA AAAGCCTGAG GAAATTGATG ATAAAACTTG GGAAACCGCA
GTTGGAGCTC TTGGGAAAGA ATATCTAGAG CTTGCTAATA AAAAACTGGG AAAGGATGGC
TGA
 
Protein sequence
MQGIRNDLKK FLAKSGLLKK FYQEKAMNYW VDVVGEEIAT NCQPKVFQGK KMIVVCSNSI 
WIQELSMRKK NLIKKLNEKV GKTVVTDIKF VTGQIPNNSG LNLTRGRSKY KEIPLETKEK
DWVEKTTSEI EDENLQKKLA KLMEQDLKYK KGKKSQGYSE CDKCGKLTNN KGICQDCIEE
NERKKLNTLI RILKDSPWLN YNELQEEIPS DMEITRRDYN RAKNQFYQRV KDELFKAKQV
FKYNQTQKNY DWLKDLLQQY VLIITEEKPE EIDDKTWETA VGALGKEYLE LANKKLGKDG