Gene Nther_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0001 
Symbol 
ID6315755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp146 
End bp1507 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content34% 
IMG OID642642363 
Productchromosomal replication initiator protein DnaA 
Protein accessionYP_001916188 
Protein GI188584643 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000208022 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAA ACATGGAAGA ATTATGGTCT AAAACTCTAG AAGAATTAAA ACAGCAACTT 
AGCAAACCAA GCTTTGAGAC CTGGTTTCAA TCCACTGAGC CTGTAGAAAT GAGTAGTACG
GATTTATATA TAAGTGTTCC TAACGAATTC ACTAAAGACT GGCTCAATTC CAGGTATAAA
AATTCAATTG AAAATTCATT AAAAAAAATA TCAGGAAAAC AGCTAAAAAT TAAATTTTTA
TTACCTGGAG AAAAAATAAA AATGGAAGAA CAAAACAATG AAAATGAAGA AAAACCAGAA
TCTACTTCTA AAAAGTCTTC CCAGGGAAGC GAACATACAA CTTGGTTAAA TCCCAAATAT
ACCTTTGATA CATTTGTTAT AGGAAATGCC AATAGATTTG CTCATGCTGC CTCTTTGGCA
GTGGCAGAAG CTCCAGCCAA GGCATATAAT CCTCTATTTA TATACGGGGG AGTAGGCTTA
GGTAAGACTC ACTTAATGCA TGCAATTGGT CATTATGTAC TCAGTCATCA ACCAAACTAT
CGGGTTGTCT ACATTTCATC GGAAAAGTTT ACAAATGAAT TTATCAACGC TATCAGAGAT
AACAAAACAG TTAATTTCCG TAATAAATAC AGAAATGTTG ATATCCTTTT AGTTGACGAT
ATTCAATTTT TAGCAGGAAA AGAACAAACT CAAGAAGAGT TTTTCCACAC TTTTAATACG
CTTCACGAAA ATGATAAGCA AATCATTATC TCAAGTGACC GTCCTCCTAA AGAAATTCCC
ACATTAGAAG ACAGGCTTAG ATCACGATTT GAATGGGGTT TGATCACAGA TATTCAAGCA
CCAGATTTAG AAACTAGAAT AGCTATCTTG AGAAAGAAAG CATATCTAGA AAAGCTTGAT
ATCCCCAATG ATGTAATTGT TTATATTGCC AATCAAATAG ATACTAATAT AAGGGAATTA
GAAGGTGGCT TAATTAGGGT TATTGCCTAT TCATCAATGG CTAATAAAAA AATAACCAAA
GAAACAGCAG AAGAGGCGTT AAAGGATATT TTACCTAATA AACAACCTAA AAAAATGACA
GTGGAGCATA TCCAAAAGAC GGTAGCACAA TATTTTGGAT TAAAGGTTGA TGATCTCAAA
GCTAAGAAGC GTACACGTTC AGTAGCTTTC CCTCGACAGA TAGCAATGTA TCTAGCAAGG
GAATTAACCG ACAGTTCACT ACCTAAAATA GGAGACGAGT TTGGTGGACG CGATCATACT
ACAGTTATGC ATGCTCATGA CAAAATAGCA AGTGACCTTA AAAAAGAATC TCATTTAAAT
GAAACTATAG ATGAAATCAA GAATCTATTA CATGGTGATT AA
 
Protein sequence
MSENMEELWS KTLEELKQQL SKPSFETWFQ STEPVEMSST DLYISVPNEF TKDWLNSRYK 
NSIENSLKKI SGKQLKIKFL LPGEKIKMEE QNNENEEKPE STSKKSSQGS EHTTWLNPKY
TFDTFVIGNA NRFAHAASLA VAEAPAKAYN PLFIYGGVGL GKTHLMHAIG HYVLSHQPNY
RVVYISSEKF TNEFINAIRD NKTVNFRNKY RNVDILLVDD IQFLAGKEQT QEEFFHTFNT
LHENDKQIII SSDRPPKEIP TLEDRLRSRF EWGLITDIQA PDLETRIAIL RKKAYLEKLD
IPNDVIVYIA NQIDTNIREL EGGLIRVIAY SSMANKKITK ETAEEALKDI LPNKQPKKMT
VEHIQKTVAQ YFGLKVDDLK AKKRTRSVAF PRQIAMYLAR ELTDSSLPKI GDEFGGRDHT
TVMHAHDKIA SDLKKESHLN ETIDEIKNLL HGD