| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_06218 |
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| Symbol | |
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| ID | 6306318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2874376 |
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| End bp | 2877402 |
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| Gene Length | 3027 bp |
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| Protein Length | 1008 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642640079 |
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| Product | Rhs family protein |
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| Protein accession | YP_001913938 |
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| Protein GI | 188577009 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.374255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTCGG CGACGACCGA CTACAACCAA CTGCAACTGG TGCTTCCCAA CGGCGCAGCG
ATCCCATTCG ATCGCCTTTC TGGAAGCGGG CTGGCTGGTC GCTGGGCACA GTCCGGTTCC
ATTTCCGGCT ATGCCGGCGC CACCATCGAG CAGGGCACGG CCTCAGGGCA CGGCTACTTG
CTCACGCTAC GCGACGGCAG CAAGATGTAT TTCAACCAGT ACTCGCCAAA CCGCTTGGAA
TGGACCACCG ATCGGTTTGG CAATCGGGTT GACTATGTCT ACGACGCGGG ACTGGTGTCG
CGCATCGTCT CTGCAAATGG ACGTTATCTG GACATTGACT ACGACAGCGA CAATCGGATC
AGCACGATCG CTGATCCATT GGGCAATACG TGGTCCTATG TCTACGACAG CTACGGCTAT
CTATCCAGCC TGACCCGCGC CGACGGCAGC ATGCGCAAGT TCACCTACAA ACGCCGCGCC
GCCACGAATA CGCTACCGCT GCAGGTGCGG CTCGAGTCCA TCTACGATGG CAAAAACCAG
CGTGTATTGC TGAATGGATT CGAGAGCGCC AACGGTAGCT GGACTGGCCG GGTGGTCAAA
CAGACCCAGG CCGACGGCGG CGTGCTGATG ATCGACTACG CGCACGTGGA CGGCAGCACG
ACAGGTGTGC TTGTGACCAA GCCGGATGGC AGCGCGCGGC GGGTGGTGTT CGATCAGGTC
AGCCATTACC CACTGACCGA CACCCAGGCG TATGGCACGG CGTTGGCGCA GACCACGACC
TATGAGCGCA GCGCGGGCGG GCAGATCACG GCCCGTATCG ACGCGCTGGG ACGACGCACC
GAGTACCGTT ACGACAGTGC CGGACGTACG ACGCAGATCA AAGCAATGGC CGGTACGACA
CAGGTACGTA CGACCACGTT GTCCTATACC GTCGAGGGCG ACCTCGCCAC GATCGTCGAT
CCGCTGAACC GCAAGACCAG CTTCGGCTAC ACGCAGCGTT GCCTGACCTC GGTCACCAAT
CCGCTTGGCA AGGTGAGCAA GGCCACCTGT AATGCCGCAG GCCAACGCCT GAGCATGGCA
GACCCGCTGG GCCACACTAC CACCTTGACG TGGACCGGCG AAGACCTCAC CCAGGTCAGT
GACGCGTTGG GCCGGAACCT GAGGTTCCGC TATGACGCAC TGGGCCGGAT GATCGCCTCG
GCAGACGCGC AGGGCAACCT CTCGCGACGC GAGTACGATC CGTTGAGCCG CGTGGTGAAA
TCGATCGACC CACTGGGCAA TGTAGTGGAG ACCGGCTTCG ATGCGAACGG CAATGTCACT
GCAATCCTGC TGCCGCACGG CAACGGCGTG ACGTATACAT ATGACACGCG CGACCGGCGC
GTCTCGCGGA CCGACGCACT GGATCAGGTG GAGCGCTGGG TCTACGACAC GATGGACCGC
GTGGTGCGCT ATACCGACCG GCGCACGCGC GTCACCACCT ATGCCTACGA CACGCTGGGC
CGGCTGACCA CGACCACGCT GCCGGGCATG GGCGGCACGT TGGCTGCCAG CTACGACAGC
GGCAACCGGA TGGTGGCGCT GGCCGACAGT CTTTCCGGCA CATTGAGCTG GACTTACGAT
TCCTTCGACG AGCTCACCCA GGCCAACGGC CCGCAGGGCA TGGTCGGCTA CACCTATGAT
GCGGTGGGTC GTCGCACCGG CATGCAGGCC GACACGCAGG CGCAGGTGCT TTACAGCTAC
GACGTAGGCG ACCGCCTGAC CGGCATCAGC CAGGGCAGCG AGTCGGTCAG CTTCGCCTAC
GACAACGCCA ATCGACTCAC TAGCCAGACG CTGCCCAATC AGGTACAGAC CGTCTACACC
TACAACAACG CCAACCAGAT GACCGGCCTT GCGTGGGGCA AGGCGGGGCA GACGGCGTTG
GGCAGCCTGG GCTATGGCTA CGACAGCATC GGCCAGTTGG TGGCGCAGAC CGGTACGCAT
GCGCCGCAAG CCTTGCCGCC CTCCAGCAGT GGCAATGTCT TCGACGACAA TAATCGGCAG
ACGCAGGCGA GCACTGTCGC GCTGAGCTAC GATGCCAACG GCAACCTGCT CAGTGATGGC
AGCCGCACCT ATGTCTGGGA CGACCGCGAC CGACTGAGCC AGATCCAGCA GGGCGGCACC
ACGATTGCCA GTTTCAGTTA CGACGCGCTG GGCCGTCGCA TCTCAAGGAG CGAGGCCGGC
ACGACCACCA ATTATTTGTA CGACGGACAG AATGTGGTGC AGGAAACGCA GGGCAGCACG
GTCAATCCGA TCCTGACCGG CCTGGGCATC GATCAACGTT ACGCCCGCAA CGACACCGGC
GGGCGGACGT ACTTCCTGAC CGATATGCTG GGCAGCACGC GGTTGCTGAC GGATGCGGGC
GGTAGCGCTG TGCAGCGGTA TGAGTATGAT CCGTATGGGG CAACCAGTCA GAGCAGCACG
GCGTATACGA ATCCGTACCA GTACACGGGG CGGGAGAAGG ATATAAACGG CTTGTACTAC
TACCGTGCGA GATACTATCG GCCGGATTTG GGTGGTTTTA TAAGCGAGGA CCCGATCCAA
TTGGCTGGAG GAGTCAATCA ATATATGTAT GTTAATGGAA ATCCAATAAT TAACGTTGAT
CCATTTGGGC TTCGGGTAGA TCTGATAAAG ATGATTGACT ATATGAATGC TCACGCTAAC
CGTAAATCTA AGGGGCAGTG TGCGAAATAC GTGCGCCAAG GTCTTGAGGC TGGCGGTGCG
GATACAAGCG GTCACCCGAT AGCTGCAGCT GACTATGGCT TGACCCTCGA AAAAAATGAT
TTCTCGCCGA TAGATCCGTC AGCCGCGCCT GAGTCTGGAG ATATAACGGT TTTTCCTGCA
ATTCCGGGAC ACCCGTACGG GCACATTGAA GCATACGACG GCTCGTCTTA TGTGTCCGAT
TTTTCTCAGT CGAATTTTTA TCCGTCACCC GCTTATGAAG GTTCCGGTCC TGTTACTTAC
AGGCTTAATC CAGGGTCTTC ATTGTAA
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| Protein sequence | MYSATTDYNQ LQLVLPNGAA IPFDRLSGSG LAGRWAQSGS ISGYAGATIE QGTASGHGYL
LTLRDGSKMY FNQYSPNRLE WTTDRFGNRV DYVYDAGLVS RIVSANGRYL DIDYDSDNRI
STIADPLGNT WSYVYDSYGY LSSLTRADGS MRKFTYKRRA ATNTLPLQVR LESIYDGKNQ
RVLLNGFESA NGSWTGRVVK QTQADGGVLM IDYAHVDGST TGVLVTKPDG SARRVVFDQV
SHYPLTDTQA YGTALAQTTT YERSAGGQIT ARIDALGRRT EYRYDSAGRT TQIKAMAGTT
QVRTTTLSYT VEGDLATIVD PLNRKTSFGY TQRCLTSVTN PLGKVSKATC NAAGQRLSMA
DPLGHTTTLT WTGEDLTQVS DALGRNLRFR YDALGRMIAS ADAQGNLSRR EYDPLSRVVK
SIDPLGNVVE TGFDANGNVT AILLPHGNGV TYTYDTRDRR VSRTDALDQV ERWVYDTMDR
VVRYTDRRTR VTTYAYDTLG RLTTTTLPGM GGTLAASYDS GNRMVALADS LSGTLSWTYD
SFDELTQANG PQGMVGYTYD AVGRRTGMQA DTQAQVLYSY DVGDRLTGIS QGSESVSFAY
DNANRLTSQT LPNQVQTVYT YNNANQMTGL AWGKAGQTAL GSLGYGYDSI GQLVAQTGTH
APQALPPSSS GNVFDDNNRQ TQASTVALSY DANGNLLSDG SRTYVWDDRD RLSQIQQGGT
TIASFSYDAL GRRISRSEAG TTTNYLYDGQ NVVQETQGST VNPILTGLGI DQRYARNDTG
GRTYFLTDML GSTRLLTDAG GSAVQRYEYD PYGATSQSST AYTNPYQYTG REKDINGLYY
YRARYYRPDL GGFISEDPIQ LAGGVNQYMY VNGNPIINVD PFGLRVDLIK MIDYMNAHAN
RKSKGQCAKY VRQGLEAGGA DTSGHPIAAA DYGLTLEKND FSPIDPSAAP ESGDITVFPA
IPGHPYGHIE AYDGSSYVSD FSQSNFYPSP AYEGSGPVTY RLNPGSSL
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