| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_06075 |
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| Symbol | |
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| ID | 6306180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2729178 |
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| End bp | 2730419 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642639942 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001913801 |
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| Protein GI | 188576872 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000151229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCCGA AGAGAACCTC GTTTCCCAAG CAGGACATCC GCGTACTGTT GCTGGAAGGC
ATCAGCCCAA CCGCCGTGGA TGTGTTCCGC GCCGCTGGCT ACTCGCAGAT CGAACTGCAC
GCCAAATCGC TGCCGGAAGA CGAGTTGATC GCCCGCATCG CCGACGCGCA TATCGTGGGC
ATCCGCTCGC GCACCCAGTT GAGCGCCGAG GTGCTGGCAC ACGCCAAGCG CCTGATCGCG
GTGGGCTGCT TCTGCATCGG CACCAACCAG GTGGATCTGG ATGCGGCCGA AGTCGCCGGC
ATTCCGGTGT TCAACGCACC CTACTCCAAT ACCCGCAGCG TGGCCGAACT GGTCATCGCC
GAAGCGATCC TGCTGCTGCG TGGTATCCCG CAAAAGAATG CCGAATGCCA CCGCGGCGGT
TGGTCCAAAT CGGCCGCGGG CAGCCATGAA ACGCGCGGCA AAGTGCTGGG CATCGTTGGC
TACGGCCATA TCGGCACCCA GGTGGGCGTG CTGGCCGAAT CGTTGGGCAT GCAAGTGATA
TTCCACGACA TCGAAACCAA GCTGTCGCTC GGCAACGCGC GCGCGGCGAT CGATCTGGAC
GACCTGCTGG CACGCGCGGA CGTGGTGACC TTGCACGTAC CGGAAACGCC GTCCACCAAG
GACATGATCG GCGCTGCAGA GATCGCCCGC ATGAAGCACG GCGCGCACCT GATCAACGCC
TCGCGCGGCA CCGTTATCGA CATCGACGCA CTGGATGCAG CGCTCACCTC CGGCCAGATC
GGCGGCGCAG CGGTGGACGT GTTCCCGATC GAGCCAAAGG GCAATGGCGA TGCATTCGCA
TCGCCGCTCA CCGCGCACGA CAACGTCATC CTGACCCCGC ACGTGGGCGG CAGCACGCTG
GAAGCGCAGG ACAATATCGG CATCGAAGTG GCGGCCAAAC TGGTGCGCTA CAGCGACAAC
GGCAGCACCT TGTCGGCGGT GAACTTCCCC GAGGTCACCC TGCCCGAGCA CCCCGACAGC
CTGCGTCTGC TGCACATCCA TCGCAACGTG CCTGGCGTGC TATCGCAGAT CAACGAACTG
TTCTCGCGCC ACAACCTCAA CATCGACGGC CAGTTTTTGC GCACCGACCC CAAGGTGGGC
TACGTGGTGA TCGACGTCAG CGCCAGCGAG GAACTTGCGG CAATACTGAA AGACGGGCTG
GCTCAGATCA CCGGCACGTT GCGGACGCGG GTCCTTTATT GA
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| Protein sequence | MSPKRTSFPK QDIRVLLLEG ISPTAVDVFR AAGYSQIELH AKSLPEDELI ARIADAHIVG
IRSRTQLSAE VLAHAKRLIA VGCFCIGTNQ VDLDAAEVAG IPVFNAPYSN TRSVAELVIA
EAILLLRGIP QKNAECHRGG WSKSAAGSHE TRGKVLGIVG YGHIGTQVGV LAESLGMQVI
FHDIETKLSL GNARAAIDLD DLLARADVVT LHVPETPSTK DMIGAAEIAR MKHGAHLINA
SRGTVIDIDA LDAALTSGQI GGAAVDVFPI EPKGNGDAFA SPLTAHDNVI LTPHVGGSTL
EAQDNIGIEV AAKLVRYSDN GSTLSAVNFP EVTLPEHPDS LRLLHIHRNV PGVLSQINEL
FSRHNLNIDG QFLRTDPKVG YVVIDVSASE ELAAILKDGL AQITGTLRTR VLY
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