Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_05829 |
Symbol | |
ID | 6305698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2235418 |
End bp | 2236785 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642639466 |
Product | poly(A) polymerase (PAP) (Plasmid copy number protein) |
Protein accession | YP_001913332 |
Protein GI | 188576403 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR01942] poly(A) polymerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.832163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGGCAATC CTGCAACACA AGACGGAAGC GCCATCATCG AAGCCTCAGT GACATCTGCG TTCACGCTGC GCGTCATTCC ACGCGACCAG CACACCATCT CGCGCAAGGA CATCAGCCCC AACGCGCTGC GCGTGCTTTA TCGCCTGCGC GAATCGGGCT TTGGTGCCTA CCTGGTCGGT GGTGCGGTCC GCGATCTGCT GGTCGGTCAC CACCCCAAGG ATTTCGATGT CGCCACCAGC GCCACGCCGG AAGAGGTCAA GGCGCTATTC CGCAACTGCC GCCTGATTGG CCGACGTTTT CGTCTGGCGC ACGTGGTGTT CGGTCGCGAA ATCATCGAAG TGGCCACCTT CCGCGCCAAT AGCGACGATG GCAGCGGCGA CCGCGAACTC GATAACGGCC GGCTGGTGCG CGACAACGTT TACGGCACCA TCGAAGAAGA CGCGATCCGC CGCGACTTCA CCTGCAACGC CCTTTACTAC GCCATCGAAG ATTTCTCGGT GCGCGATTAC TGCGGCGGCT TCGAAGATGT GCAGGCGCGC CTGATGAAGT TGATTGGCGA CCCGGAGCTG CGTTACCAGG AAGACCCGGT GCGCATGCTG CGCGCGGTGC GCCTGGCGTC CAAGTTGAAC TTCGAGATCG AAGCCGGCAC CGCCGAACCG ATCCCGCGCC TGGCCGGGCT GTTATCCGAG GCCGCACCTG CGCGTCTGTT TGAAGAAATC CTCAAACTGT TCCTGTCCGG ACATGGCGTG GCCAGCTTCG AAGGCTTGGA GCGTTATGGC CTGTTCGGCG CGCTGTTTCC CGAAAGCGCG GCAGCATTAA AATCCAACCG CAGCGGCGCG TTGCGCGCCA TGGTGCTGGA AGGCCTGCGC AACACCGATG CCCGCGTGGC CAACGACGAG CCGGTGTCGC CGGCATTCCT GTTTGCGTTG CTGCTGTGGC CGGCGTTCTG CCGCACCTTG ATGGGGCTGC AGGCGCAAGG CGTGCAACCG GAAGATGCGC AGCGCCGCGC AGCCGATCGC GTCACCTTGC ACCAGCTGGA GCGCGTGGCG TTACCGCGTC GCTTCTCGCT GCCGATGCAG GAAATTTGGT TGATGCAGAC GCGCTTCTCG TCGCGTCAGC GCAAGCGGGT GTTGCGCACC TTGTCGCATC CGCGCTTCCG CGCGGCGTTC GATTTCCTGG TGCTGCGCCA GTGCGCTTCG CCCGATCACG CCGGCGATGT GGAGTTCTGG AGTGAGGCGC AGAAGTCGCC CGGCCAGGAG CTGGTGGAGG CGATCGAATC GGCGCAGGCA GACCAGGAAG GCGAGGAGGG CGCACCGCGC AAGCGTCGCC GCCGCCGGCG CCGCACCGGC GCGCCCGCAG GCGACTAG
|
Protein sequence | MGNPATQDGS AIIEASVTSA FTLRVIPRDQ HTISRKDISP NALRVLYRLR ESGFGAYLVG GAVRDLLVGH HPKDFDVATS ATPEEVKALF RNCRLIGRRF RLAHVVFGRE IIEVATFRAN SDDGSGDREL DNGRLVRDNV YGTIEEDAIR RDFTCNALYY AIEDFSVRDY CGGFEDVQAR LMKLIGDPEL RYQEDPVRML RAVRLASKLN FEIEAGTAEP IPRLAGLLSE AAPARLFEEI LKLFLSGHGV ASFEGLERYG LFGALFPESA AALKSNRSGA LRAMVLEGLR NTDARVANDE PVSPAFLFAL LLWPAFCRTL MGLQAQGVQP EDAQRRAADR VTLHQLERVA LPRRFSLPMQ EIWLMQTRFS SRQRKRVLRT LSHPRFRAAF DFLVLRQCAS PDHAGDVEFW SEAQKSPGQE LVEAIESAQA DQEGEEGAPR KRRRRRRRTG APAGD
|
| |