Gene PXO_05718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_05718 
SymbolavrXa27 
ID6307511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp4112038 
End bp4114644 
Gene Length2607 bp 
Protein Length868 aa 
Translation table11 
GC content66% 
IMG OID642641249 
ProductTAL effector AvrBs3/PthA 
Protein accessionYP_001915097 
Protein GI188578168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000318376 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCAG TGGAGGCAGT GCATGCATCG CGCAATGCAC TGACGGGTGC CCCCCTGAAC 
CTGACCCCGG ACCAAGTGGT GGCCATCGCC AGCAATATTG GCGGCAACCA GGCGCTGGAG
ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC CAGGACCATG GCCTGACCCC GGACCAAGTG
GTGGCCATCG CCAACAATAA CGGCGGCAAG CAGGCGCTGG AGACGGTGCA GCGGCTGTTG
CCGGTGCTGT GCCAGGCCCA TGGCCTGACC CCGGACCAAG TGGTGGCCAT CGCCAGCAAT
GGCGGCAAGC AGGCGCTGGA GACGGTGCAG CGGCTGTTGC CGGTGCTGTG CCAGGCCCAT
GGCCTGACCC CGAACCAGGT CGTGGCCATC GCCAGCAATG GCGGCGGCAA GCAGGCGCTG
GAGACGGTGC AGCGGCTGTT GCCGGTGCTG TGCCAGGCCC ATGGCCTGAC CCAGGACCAG
GTGGTGGCCA TCGCCAGCAA TAGTGGCGGC AAGCAGGCGC TGGAGACGGT GCAGCGGCTG
TTGCCGGTGC TGTGCCAGGC CCATGGCCTG ACCCCGGCCC AAGTGGTGGC CATCGCCAGC
AATAACGGCG GCAAGCAGGC GCTGGAGACG GTGCAGCGGC TGTTTCCGGT GCTGTGCCAG
GACCATGGCC TGACCCCGGA CCAGGTGGTG ACCATCGCCA ACAATAACGG CGGCAAGCAG
GCGCTGGAGA CGGTGCAGCG GCTGTTGCCG GTGCTGTGCC AGGCCCATGG CTTGATCCCG
GACCAGGTGG TGGCCATCGC CAACAATAAC GGCGGCAAGC AGGCGCTGGA GACGGTGCAG
CGGCTGTTGC CGGTGCTGTG CCAGGCCCAT GGCCTGACCC CGGCCCAAGT GGTGGCCATC
GCCAGCAATA TTGGCGGCAA GCAGGCGCTG GAGACGGTGC AGCGGCTGTT GCCGGTGCTG
TGCCGGGCCC ATGGCCTGAC CCCGGCCCAA GTGGTGGCCA TCGCCAACAA TAACGGCGGC
AAGCAGGCGC TGGAGACGGT GCAGCGGCTG TTGCCGGTGC TGTGCCAGGC CCATGGCCTG
ACCCCGGATC AAGTGGTGGC CATCGCCAGC AATATTGGCG GCAAGCAGGC GCTGGAGACG
GTGCAGCGCC TGTTGCCGGT GCTGTGCCAG GACCATGGCC TGACCCCGGA CCAGGTCGTG
GCCATCGCCA GCAATGGCGG CAAGCAGGCG CTGGAGACGG TGCAGCGGCT GTTGCCGGTG
CTGTGCCAGG ACCATGGCCT GACCCCGGCC CAGGTGGTGG CCATCGCCAG CCACGATGGC
GGCAAGCAGG CGCTGGAGAC GGTGCAGCGG CTGTTGCCGG TGCTGTGCCA GGACCATGGC
CTGACCCTGG ACCAGGTCGT GGCCATCGCC AGCCACGATG GCGGCAAGCA GGCGCTGGAG
ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC CAGGACCATG GCCTGACCCT GGACCAGGTG
GTGGCCATCG CCAGCAATAT TGGCGGCAAG CAGGCGCTGG AGACGGTGCA GCGGCTGTTG
CCGGTGCTGT GCCAGGACCA TGGCCTGACC CCGGACCAGG TCGTGGCCAT CGCCAGCAAT
GGCGGCGGCA AGCAGGCGCT GGAGACGGTG CAACGGCTGT TGCCGGTGCT GTGCCAGGAC
CATGGCCTGA CCCCGGACCA GGTCGTGGCC ATCGCCAGCA ATGGCGGCGG CAAGCAGGCG
CTGGAGAGCA TTGTTGCCCA GTTATCTCGC CCTGATCCGG CGTTGGCCGC GTTGACCAAC
GACCACCTCG TCGCCTTGGC CTGCCTCGGC GGACGTCCTG CCCTGGATGC AGTGAAAAAG
GGATTGCCGC ACGCGCCGGA ATTGATCAGA AGAATCAATC GCCGTATTCC CGAACGCACG
TCCCATCGCG TTGCCGACCT CGCGCACGTG GTGCGCGTGC TTGGTTTTTT CCAGAGCCAC
TCCCACCCAG CGCAAGCATT CGATGACGCC ATGACGCAGT TCGGGATGAG CAGGCACGGG
TTGGTACAGC TCTTTCGCAG AGTGGGCGTC ACCGAATTCG AAGCCCGCTG CGGAACGCTC
CCCCCAGCCT CGCAGCGTTG GGACCGTATC CTCCAGGCAT CAGGGATGAA AAGGGCCAAA
CCGTCCCCTA CTTCAGCTCA AACGCCGGAT CAGGCGTCTT TGCATGCATT CGCCGATTCG
CTGGAGCGTG ACCTTGATGC GCCCAGCCCA ATGCACGAGG GAGATCAGAC GCGGGCAAGC
AGCCGTAAAC GGTCCCGATC GGATCGTGCT GTCACCGGCC CCTCCACACA GCAATCTTTC
GAGGTGCGCG TTCCCGAACA GCGCGATGCG CTGCATTTGC CCCTCAGCTG GAGGGTAAAA
CGCCCGCGTA CCAGGATCGG GGGCGGCCTC CCGGATCCTG GTACGCCCAT CGCTGCCGAC
CTGGCAGCGT CCAGCACCGT GATGTGGGAA CAAGATGCGG CCCCCTTCGC AGGGGCAGCG
GATGATTTCC CGGCATTCAA CGAAGAGGAG CTCGCATGGT TGATGGAGCT ATTGCCTCAG
TCAGGCTCAG TCGGAGGGAC GATCTGA
 
Protein sequence
MTAVEAVHAS RNALTGAPLN LTPDQVVAIA SNIGGNQALE TVQRLLPVLC QDHGLTPDQV 
VAIANNNGGK QALETVQRLL PVLCQAHGLT PDQVVAIASN GGKQALETVQ RLLPVLCQAH
GLTPNQVVAI ASNGGGKQAL ETVQRLLPVL CQAHGLTQDQ VVAIASNSGG KQALETVQRL
LPVLCQAHGL TPAQVVAIAS NNGGKQALET VQRLFPVLCQ DHGLTPDQVV TIANNNGGKQ
ALETVQRLLP VLCQAHGLIP DQVVAIANNN GGKQALETVQ RLLPVLCQAH GLTPAQVVAI
ASNIGGKQAL ETVQRLLPVL CRAHGLTPAQ VVAIANNNGG KQALETVQRL LPVLCQAHGL
TPDQVVAIAS NIGGKQALET VQRLLPVLCQ DHGLTPDQVV AIASNGGKQA LETVQRLLPV
LCQDHGLTPA QVVAIASHDG GKQALETVQR LLPVLCQDHG LTLDQVVAIA SHDGGKQALE
TVQRLLPVLC QDHGLTLDQV VAIASNIGGK QALETVQRLL PVLCQDHGLT PDQVVAIASN
GGGKQALETV QRLLPVLCQD HGLTPDQVVA IASNGGGKQA LESIVAQLSR PDPALAALTN
DHLVALACLG GRPALDAVKK GLPHAPELIR RINRRIPERT SHRVADLAHV VRVLGFFQSH
SHPAQAFDDA MTQFGMSRHG LVQLFRRVGV TEFEARCGTL PPASQRWDRI LQASGMKRAK
PSPTSAQTPD QASLHAFADS LERDLDAPSP MHEGDQTRAS SRKRSRSDRA VTGPSTQQSF
EVRVPEQRDA LHLPLSWRVK RPRTRIGGGL PDPGTPIAAD LAASSTVMWE QDAAPFAGAA
DDFPAFNEEE LAWLMELLPQ SGSVGGTI