Gene PXO_05536 details

Gene Information

• Locus tag: PXO_05536
• Symbol: lspA
• ID: 6305052
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 1540510
• End bp: 1541010
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642638825
• Product: lipoprotein signal peptidase
• Protein accession: YP_001912702
• Protein GI: 188575773
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.192233
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCAAC GACCTAATCC CTCCGCACTG ATCTGGCTGC TGCTCTCCGC GCTAGTGATT 
GGCCTGGACC AGTGGAGCAA GGCTTGGGTG CTGTCCAGCC TGCCCGAGTA CACGTCGGTG 
CCGGTGATCG ACGGTTTCTG GAACTGGTAC CGCACTTACA ACACCGGCGC GGCCTTCAGC 
TTTTTGAGCG ATGCCGGCGG CTGGCAGCTG TGGTTCTTCA CTGCGTTGGC GATGGGCATC 
AGCGGCCTGC TGGCGTTCTG GCTCTCGCGC ACCGCGCGCG GGCACTGGCG CAGCGCGCTG 
CCGTATGCGC TGGTGATCGG CGGGGCGATC GGCAACGTGA TCGACCGGCT CATGCACGGC 
CACGTGGTGG ATTTCATCCA GTGGTACATC GGCAGCCATA CCTGGCCGTC CTTCAACATC 
GCCGATTCGG CGATCGTGGG TGGCGCCATC GGCATCGCGG TGTTTGGGTT GTTCGACAAA 
GCCGGCAAGC AGGCGTCGTG A 

 

Protein sequence

MSQRPNPSAL IWLLLSALVI GLDQWSKAWV LSSLPEYTSV PVIDGFWNWY RTYNTGAAFS 
FLSDAGGWQL WFFTALAMGI SGLLAFWLSR TARGHWRSAL PYALVIGGAI GNVIDRLMHG 
HVVDFIQWYI GSHTWPSFNI ADSAIVGGAI GIAVFGLFDK AGKQAS