Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04888 |
Symbol | |
ID | 6305002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1487430 |
End bp | 1488293 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642638775 |
Product | type IV prepilin peptidase |
Protein accession | YP_001912652 |
Protein GI | 188575723 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.528237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTTC TCGACCAGCA TCCCGGTCTC GGCTTTCCCG CCGCGGCCGG ACTGGGACTG CTGATCGGCA GCTTCCTGAA CGTGGTGATC CTGCGCTTGC CCAGGCGTAT GGAGTGGCAA TGGCGACGCG ATGCACGCGA GATCCTGGAG CTGCCGGACA TCTATGAGCC GCCGCCGCCG GGGATCGTGG TAGAGCCTTC GCATGACCCG GTCACTGGCG ACAAGCTCAA ATGGTGGGAG AACATCCCGC TCTTCAGTTG GCTGATGTTG CGCGGCAAGT CGCGCTACAG CGGCAAGCCG ATCTCCATCC AATATCCATT AGTCGAGTTG CTGACGTCGA TCCTGTGCGT GGCAAGCGTC TGGCGCTTCG GCTTTGGCTG GCAGGGCTTC GGCGCGATCG TGCTGAGCTG TTTCCTGGTG GCGATGTCGG GCATCGACCT GCGTCACAAG CTGCTGCCCG ACCAATTGAC TCTGCCGCTG ATGTGGTTGG GCCTGGTCGG CTCGATGGAC AACCTCTACA TGCCAGCCAA GCCCGCCCTA TTGGGCGCGA CGGTTGGCTA TGTGTCGCTA TGGACGGTGT GGTGGCTGTT CAAGCAGCTC ACCGGCAAGG AAGGTATGGG CCATGGCGAT TTCAAACTAT TGGCCGCGCT TGGCGCGTGG TGTGGGTTGA AAGGCATCCT GCCCATCATC CTGATCTCCT CGCTGGTTGG TGCCATCCTC GGCTCGATCT GGCTAGTCGC CAAGGGCCGC GACCGCGCCA CCCCCATCCC GTTCGGCCCC TACCTGGCCA TCGCCGGCTG GGTGGTGTTC TTCTGGGGCA ACGACCTGGT GGACGGCTAC CTGCACTTCG CAGGTCTGCG TTGA
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Protein sequence | MAFLDQHPGL GFPAAAGLGL LIGSFLNVVI LRLPRRMEWQ WRRDAREILE LPDIYEPPPP GIVVEPSHDP VTGDKLKWWE NIPLFSWLML RGKSRYSGKP ISIQYPLVEL LTSILCVASV WRFGFGWQGF GAIVLSCFLV AMSGIDLRHK LLPDQLTLPL MWLGLVGSMD NLYMPAKPAL LGATVGYVSL WTVWWLFKQL TGKEGMGHGD FKLLAALGAW CGLKGILPII LISSLVGAIL GSIWLVAKGR DRATPIPFGP YLAIAGWVVF FWGNDLVDGY LHFAGLR
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