| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04882 |
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| Symbol | pilB |
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| ID | 6305008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1494234 |
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| End bp | 1495967 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642638781 |
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| Product | type IV-A pilus assembly ATPase PilB |
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| Protein accession | YP_001912658 |
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| Protein GI | 188575729 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.415694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAG TATCTACAAC CAACCTCGTT GGCATCACCG GCATCGCTCG TCGCCTTGTG
CAGGATGGCG CCCTGGAGGA AACCGCTGCG CGGACAGCGA TGGAACAGGC GGCCGCTGCC
AAGGTGCCGC TGCCGCAGTG GTTTGCCGAG AACAGGCTGG TGTCGGCGTC GCAGCTTGCG
GCGGCCAATG CAGTGGAATT TGGCATGCCA CTGATGGATG TGTCTGTGTT CGACGCTAAC
CAGAACGCAG TCAAGCTAGT CAGCGAGGAG TTGCTCCAGA AGTACCATGT GCTGCCGCTG
TTCAAGCGCG GCAATCGGTT GTTTGTGGGA GTGAGCAACC CGACTCAGAC CCGTGCACTA
GATGACATCA AGTTTCATAC GAATCTGGTC GTCGAGCCGA TTCTTGTCGA TGAGGACCAA
ATCCGTCGCA CATTGGAGCA GTGGCAGGCA AGCAATGCCT CATTTGGATC ATCGCTTGGC
AACGACGACG AGGAAATGGG GGATCTGGAC GTCTCCACCG GCGACGAAGA CATGGGCGCC
GGCGGGGATT CCGGGGTCGA TGCCAAGGGC GACGACACGC CGGTGGTGAA GTTCGTCAAC
AAGGTGCTGG TGGATGCGAT CCGGCGGGGG GCCTCGGACA TCCATTTCGA GCCGTACGAA
GACGACTACC GGGTGCGGTT GCGGATCGAC GGGTTGCTGA AGAACGTGGC CAAGGCGCCG
GTGAAGCTGA GCCAGCGCAT CGCGGCGCGT TTGAAGGTGA TGTCGCAGCT GGATATCGCC
GAGAAGCGGG TGCCGCAGGA CGGGCGCATC AAGCTCAACC TGTCCAAGAC CAAGCAGATC
GACTTCCGTG TCAGCACCTT GCCGACCCTG TTCGGTGAGA AGGTGGTGCT GCGTATCCTG
GACGGCAGCG CGGCCAAGCT GGGCATCGAC AAGCTGGGCT ACGAGCCGGA CCAACAGAAG
CTGTTCCTGG AAGCGATCCA CAAGCCGTAC GGCATGGTGC TGGTGACCGG GCCGACCGGC
TCGGGCAAGA CGGTGTCGCT GTACACGGCG CTGGGCATCC TCAACGATGA GACGCGCAAC
ATCTCCACCG CCGAGGATCC GGTCGAAATT CGCCTGCCTG GCGTCAACCA GGTGCAGCAG
AACAACAAGC GCGGCATGAC CTTCGCCGCG GCGCTGCGTT CGTTCCTGCG ACAGGATCCG
GACATCATCA TGGTTGGCGA AATCCGCGAC CTGGAAACGG CCGAGATTGC GATCAAGGCG
GCGCAGACCG GTCACATGGT GCTGTCCACG CTGCATACCA ACGATGCGCC GCAGACCATC
GCGCGTCTGA TGAACATGGG GATCGCGCCG TACAACATCA CCTCGTCGGT GACCTTGGTG
ATCGCGCAGC GTCTGGCGCG GCGGTTGTGC AATAACTGCA AGCGCAAGTC GACGTTGCCG
GAGCATGCAC TGCTGGCGGA AGGCTTTACG CCGGAGCAGG TCGCGAATAT GGAGCTTTAT
GAAGCCGTGG GTTGCGACGA GTGCACCGAG GGCTACAAGG GCCGTACCGG TATCTATCAG
GTGATGCCGA TGACCGACGA AATCGGCGCG ATCGTGCTGG AAGGCGGCAA TGCGATGCAG
ATTGCCGAGG CCGCTCAGAA GATCGGCATC CGGGACTTGC GGCAGTCGGC GTTGATGAAG
GCCTCGCAAG GCGTGACCAG CCTGGCCGAG ATCAATCGGG TGACCAAGGA CTGA
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| Protein sequence | MNSVSTTNLV GITGIARRLV QDGALEETAA RTAMEQAAAA KVPLPQWFAE NRLVSASQLA
AANAVEFGMP LMDVSVFDAN QNAVKLVSEE LLQKYHVLPL FKRGNRLFVG VSNPTQTRAL
DDIKFHTNLV VEPILVDEDQ IRRTLEQWQA SNASFGSSLG NDDEEMGDLD VSTGDEDMGA
GGDSGVDAKG DDTPVVKFVN KVLVDAIRRG ASDIHFEPYE DDYRVRLRID GLLKNVAKAP
VKLSQRIAAR LKVMSQLDIA EKRVPQDGRI KLNLSKTKQI DFRVSTLPTL FGEKVVLRIL
DGSAAKLGID KLGYEPDQQK LFLEAIHKPY GMVLVTGPTG SGKTVSLYTA LGILNDETRN
ISTAEDPVEI RLPGVNQVQQ NNKRGMTFAA ALRSFLRQDP DIIMVGEIRD LETAEIAIKA
AQTGHMVLST LHTNDAPQTI ARLMNMGIAP YNITSSVTLV IAQRLARRLC NNCKRKSTLP
EHALLAEGFT PEQVANMELY EAVGCDECTE GYKGRTGIYQ VMPMTDEIGA IVLEGGNAMQ
IAEAAQKIGI RDLRQSALMK ASQGVTSLAE INRVTKD
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