Gene PXO_04780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04780 
Symbol 
ID6304957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp1440283 
End bp1441746 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content70% 
IMG OID642638730 
ProductDNA methylation and regulatory protein 
Protein accessionYP_001912607 
Protein GI188575678 
COG category[L] Replication, recombination and repair
[F] Nucleotide transport and metabolism 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATCG CGACGCCCGA CCGAACCCAA TGCGACCGTG CCCGCCTGGC GCGCGATGCA 
CGTTTCGACG GGTTGTTTTT GACCGCCGTG CGCAGCACCG GCATCTATTG CCGCCCGGTG
TGTCCGGCAC CGCCGCCGAA GCCGGCCAAT GTCAGCGACT ACCCCACTGC CGCGGCGGCC
AGCGCGGCCG GATACCGCCC GTGTCTGCGC TGCCGGCCGG AGCTGTCGCC GCAGGCGCAG
CAGCATCTGG GCGAAGAAAG CGTGCAGCGC GCACTGGCGA TGATTGCCGA CGGCGCGCTG
CAGGAGCAGC CGGTGCAGAC GCTGTCCGAT GCGGTGGGCT TGAGCGCGCG CCAGCTGCAG
CAGCAATTCG TGCAACAGTT GGGTGCCACG CCGATCCAGG TGCACGGGAC GCATCGGCTG
CTGCTGGCCA AGCAATTACT CACCGAAACC GCACTGCCGG TCACCGAGGT GGCGCTCGCA
GCAGGCTTCA ACAGCTTGCG GCGGTTCAAT GCGGCCTTCC TGCAGGGCTG CGGCATGCCG
CCTTCTGCAC TGCGCAAGCA GCGTGCCGAG GTGCCGGGCG GCGAGCTCAC ACTGCGCCTG
GGCTATCGCC CGCCACTGGA TCTGCCGGCG ATGCTGGCCT TCTTGCAGCG CCGTGCGATC
CCGGGGATCG AGCAGGTCGA TGCCAGCGGC GACCGTCGCG TGACCGGCCC GCCGGGCAAG
GCCAGCGTGA TCGGCGTCAG CGCGGCGCCG CAGCGCGCGG AACTCCTGCT GCGCATCGGG
GCGACCGACC CACGCCAGAT TCCGCAGAGC GTGCGGCGCG TGCGACGGCT GTTCGATCTG
GATGCGGACT TGCAAGCCGT GCCCGCGACG CTTGCGCCCG ACCCACTGCT GGCCGAGGCA
ATCGCACGCC GACCAGGCCT GCGCGTGCCC GGTGGTTGGG ACGGCTTCGA GGTGGCGGTA
CGTGCGGTGC TGGGCCAGCA GATCAGTGCC GCCGGCACGG CGACCTTGGC GGCGCGGCTG
GTGGACCCTC ATGGCGGCCA TCATGCCGAC ATGCCACCTG GACTGGATCG CAGTTTCCCC
ACGCCCGACC AGCTGGCCGA CGCGCCACTG GAACAACTCG GGCTACCGCG TGCGGGCGCC
GCCACGCTGC GTGCGCTGGC ATCGGCTTGC GCACAAGGCC AGCTGCACTG CGGTGCCGGG
CAGCGTCTGC CCGACTTCCT CGCCGCCTGC ACCGCGCTAC CCGGAATCGG GCCGTGGACC
GCGCATTACC TGGCCATGCG TGCGTTGTCG CATCCCGATG CGTTTCCGGC TGGCGATTTG
ATCCTGCAGC AGGTGCTCGG CGCCCCCGAG CGCCTGAGCG CGCGCGCCAC CGATGCACGT
TCGCAAGCGT GGCGACCGTG GTGCGCCTAC GCCGTGCTGC ACCTGTGGCA TCTGGCCAAC
GACCGTAAGG ACACCCGCGC ATGA
 
Protein sequence
MQIATPDRTQ CDRARLARDA RFDGLFLTAV RSTGIYCRPV CPAPPPKPAN VSDYPTAAAA 
SAAGYRPCLR CRPELSPQAQ QHLGEESVQR ALAMIADGAL QEQPVQTLSD AVGLSARQLQ
QQFVQQLGAT PIQVHGTHRL LLAKQLLTET ALPVTEVALA AGFNSLRRFN AAFLQGCGMP
PSALRKQRAE VPGGELTLRL GYRPPLDLPA MLAFLQRRAI PGIEQVDASG DRRVTGPPGK
ASVIGVSAAP QRAELLLRIG ATDPRQIPQS VRRVRRLFDL DADLQAVPAT LAPDPLLAEA
IARRPGLRVP GGWDGFEVAV RAVLGQQISA AGTATLAARL VDPHGGHHAD MPPGLDRSFP
TPDQLADAPL EQLGLPRAGA ATLRALASAC AQGQLHCGAG QRLPDFLAAC TALPGIGPWT
AHYLAMRALS HPDAFPAGDL ILQQVLGAPE RLSARATDAR SQAWRPWCAY AVLHLWHLAN
DRKDTRA