| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04518 |
|---|
| Symbol | rplB |
|---|
| ID | 6304771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 1258717 |
|---|
| End bp | 1259535 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642638545 |
|---|
| Product | 50S ribosomal protein L2 |
|---|
| Protein accession | YP_001912422 |
|---|
| Protein GI | 188575493 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0090] Ribosomal protein L2 |
|---|
| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000000114492 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTCA AACCCACCTC TCCCGGCCGT CGTTCTGCCG TGCGCGTGGT TACTCCCGAT
CTGCACAAGG GCGCACCGCA CGCGGCGCTG CTCGACTCGC AGAGCAAGTC CGGTGGTCGT
AACCACCACG GCCGCATCAC CGTGCGTCAC GTCGGTGGTG GCCACAAGCA GCACTACCGC
ATCATCGACT TCAAGCGCAA CAAGGAAGGC ATTCCGGCGC GTGTGGAGCG GATTGAATAC
GATCCGAACC GTACCGCTCA TATCGCCCTG CTGTGCTACG TCGACGGCGA ACGCTGCTAC
ATCATCGCCC CCAAAGGCCT GAAGGCGGGC GACCAGGTCA TTGCCGGTGC CAATGCACCG
ATCAAGACCG GAAACACGCT GCCGCTGCGC AACATCCCGG TCGGTACGAC GGTTCACGGT
ATCGAGCTGA AGCCGGGTAA AGGCGCTCAG ATCGCACGCG CTGCCGGTGC AGCCGTCCAG
CTGGTCGCTC GCGAAGGCAT CTATGCCACG CTGCGTCTGC GCTCGGGCGA AATGCGCAAG
GTGCCGGTCG AGTGCCGCGC CACCATTGGC GAAGTCGGCA ACGACGAGCA CAACCTCGAG
AAGTTGGGCA AGGCCGGTGC CAAGCGTTGG CGCGGTGTTC GCCCGACCGT TCGCGGTGCG
GCCATGAACC CGGTCGATCA CCCGCACGGT GGTGGTGAAG CGAAGGCTGG TCAGGGTAAT
CCGCATCCGG TCACCCCGTG GGGTGTTCCG ACCAAGGGTT ACAAGACGCG CAAGAACAAG
CGCACCCAGC AATTCATCGT CCGCGATCGT AGGGGCTAA
|
|---|
| Protein sequence | MKFKPTSPGR RSAVRVVTPD LHKGAPHAAL LDSQSKSGGR NHHGRITVRH VGGGHKQHYR
IIDFKRNKEG IPARVERIEY DPNRTAHIAL LCYVDGERCY IIAPKGLKAG DQVIAGANAP
IKTGNTLPLR NIPVGTTVHG IELKPGKGAQ IARAAGAAVQ LVAREGIYAT LRLRSGEMRK
VPVECRATIG EVGNDEHNLE KLGKAGAKRW RGVRPTVRGA AMNPVDHPHG GGEAKAGQGN
PHPVTPWGVP TKGYKTRKNK RTQQFIVRDR RG
|
|---|
| |