| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04384 |
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| Symbol | kdpD |
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| ID | 6304553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1041019 |
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| End bp | 1043679 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642638328 |
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| Product | sensor protein KdpD |
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| Protein accession | YP_001912210 |
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| Protein GI | 188575281 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACG CCCGCACCCA GCAAGCCGAT GCCTTGATCG GCGAATTACA GCGCGAACAC
GGTGGGCGGT TGACGGTGTT CCTGGGTGCC GCGCCGGGGG TGGGCAAGAC CTACGCCATG
TTGTCGCGGG CGCGCGAGCG CCTGCGGCAG GGCATGGATG TGGTGGCCGG TGTGGTGGAG
ACGCACGGGC GCAGCGAAAC CGCTGCGTTG CTGGAGGGTT TGCCGCTGCT GCCGCGCGCG
CGCGTGAGTT ACCAGGGCCG CATGCTGGAA GAACTCGATC TGGATGCATT GCTGGCACGC
AAACCGCGGC TGGCCCTGAT CGATGAGCTG GCGCACCGCA ACGTGCCCGG CAGCCGCCAT
GAGCGGCGCT GGCAAGACAT CGTGGAGTTG CTCGATGCCG GTATCGACGT CTATACCACG
GTCAACATCC AGCACCTGGA AAGCCTCAAC GACATCGTGC TGCGCATCAC CGGCGTGCGC
GTGTCCGAGA CCGTGCCCGA TGCCGTGTTC GACCGCCTGC GCGACATCGT GCTGGTCGAT
CTGCCGCCAC GCGAACTGAT CGAGCGCCTG CAACAGGGCA AGGTGTACCT GCCCGAGCAG
GCCACGCAGG CGTTGCAGGC GTTTTTCTCG CCATCCAATC TCACCGCGTT GCGCGAGCTG
GCGATGCAGA CCGCTGCCGA CCGCGTCGAC AGCGATCTGC GCGACACCCA GGCCGCGCGC
GGTTTGCCTG GCACCGCCGC GTTGCGACGC CGCGTGGTGG TAGCCATCGA TGGCCGTGGC
AGCTCGGATT ATCTGGTGCG CGTGGCGCGG CGTCTGTCGG AGCGGCGCGA TGCACCGTGG
ACGGTAGTCA CCGTGCAGAC CCGCACCGTG ACCGATGCGG CCTGGCGGCT GGAGATCGAC
CGTGCGTTCG CGTTGACGCG TCGCCTCGGT GGCGACACCT CGCTGCTGCA CGGGACGAAC
GTCGCCGACG CCTTGCTGGA TTTCGCCGCG CAAAACGGCA TCTCCACCCT GGTGCTGGGG
CGTACCCGCG AACGCCCGTT GGCACGCATG TTCAATCGCA CGTTGACCCA GCAATTGTTG
CAACGTGGCG CGCATTACGA ACTGGTCATC GTCAGCTCCG CCGATGCGCG CGCACGCGCG
CGTCAGCGTT GGCGTCATCC GCGCCAATGG CTGCAGCGAT ACGACCTGGT GTTCGCCGCG
ATTGCAGCAG CCGGTGCGGT GGGCGTGGCG TGGTTGCTGC AACGCTGGAC CGACATCAAC
GACTTGTCGA TGGTGTTCAT CGTCGCGGTG GTGTTGGTGG CCTCGCGCAC GCGCATGGCC
GCTGCGGTGG TCGCCGCACT GCTGAGTTTT GTCGCCTACA ACTTCTTTTT CATCGAACCG
CGTTTCACCT TGCAGATCAG TGCGCGCCAG GGCGTGGTGA CGGTGTGCAT GTTCCTGATC
GCCGCGTTGG TCGCCGGCCG GCTGGCCTCG CGTTTGCGCA GCCAGGTACT GGCCTTGCGC
GCAGCCAATG CGCACGCCAA CGTGTTGCAG GCGCTTGCCC GCCAGCTCAG CACCGCTGCC
GATCTGGGCC AGGTGCTGGA AGCCGGTCGT CGCGCGCTGG CCACTGCGCT GGATGCCGAC
GTCTGGTTAC GCCTGGAGCA GCGCGAAAGC GATGCCCCCA CCAGCTTCGG TGCGCTCGAT
CGCAGCGCCG CCGATTGGAC CCAGCGGCAT GGCCAGCCCG CCGGCCGCTT CACCGATACC
TTGGCCGGCG CGCAGTGGTG GTGCCTGCCG GTGCGCCATG AGCGCGGTAC ATTGGGCGTC
GCTGCGTTGC GCTTTCGTCA GGGCGTGCAA CGGCCCGGTC TGGAACAACG CCGCCTGGCC
GAAGCGATGG TGGAAGACAT CGGCCAGGCG GCGCTACGCA CCCGCCTGGT CGCCGATCTG
GAAGGCGCAC GTGTGAGTGG CGAAACCGAG CGCCTGCGCT CGGCATTGTT GTCGTCGGTG
TCGCACGACT TGCGCTCGCC GCTGGCCTCG ATGATCGGCT CGGCCAGCAG CCTGGCCAGC
TACGGTGATG CGATGGACGC GCACGATCGC CACAGCCTGC TCGACACCAT CCAGCTTGAA
GGCGAGCGAC TGGATCGCTA CATCCAGAAT CTGCTTGATA TGACCCGGCT TGGCCACACC
GGGCTGACCG TGAATCGCGA CTGGATCGGC GTGGACGAAT TGATCGGCTC GGCCACCCGC
CGCCTGCAGC GTTACCAGCC CGACGTGCGC CTGCAGCTGG ACCTGGCCGC CGACCTGCCG
GCGATCTGGG TGCATCCGGC GCTGGTGGAA CAGGCCATCT TCAACGTGCT GGAAAATGCG
GCGAAGTTCT CGCCGCCCGG CATCGCGGTC ACCGTGCAGG CGACGCTGCG CAGCGGCGCG
CTGCAGATCG ACATCGGCGA CCAGGGGCCG GGCATTCCCG AAGACGAGCG CGCGCGCATC
TTCGACATGT TCTACAGCGT GGAACGCGGC GACCGTGGGC GCAACGGCAC CGGCTTGGGC
CTTGCCATCT GCCAGGGCAT GATCGGCGCG CACGGCGGCA GCGTAGAGGC ATTGGCAGGC
GCGCATGGTC ACGGCACCAC AATTCGCATT ACGCTGCCGT TGCTCGTTCC CGCCGCGCCA
CCTCGCCCCG ATGCCGACTG A
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| Protein sequence | MNDARTQQAD ALIGELQREH GGRLTVFLGA APGVGKTYAM LSRARERLRQ GMDVVAGVVE
THGRSETAAL LEGLPLLPRA RVSYQGRMLE ELDLDALLAR KPRLALIDEL AHRNVPGSRH
ERRWQDIVEL LDAGIDVYTT VNIQHLESLN DIVLRITGVR VSETVPDAVF DRLRDIVLVD
LPPRELIERL QQGKVYLPEQ ATQALQAFFS PSNLTALREL AMQTAADRVD SDLRDTQAAR
GLPGTAALRR RVVVAIDGRG SSDYLVRVAR RLSERRDAPW TVVTVQTRTV TDAAWRLEID
RAFALTRRLG GDTSLLHGTN VADALLDFAA QNGISTLVLG RTRERPLARM FNRTLTQQLL
QRGAHYELVI VSSADARARA RQRWRHPRQW LQRYDLVFAA IAAAGAVGVA WLLQRWTDIN
DLSMVFIVAV VLVASRTRMA AAVVAALLSF VAYNFFFIEP RFTLQISARQ GVVTVCMFLI
AALVAGRLAS RLRSQVLALR AANAHANVLQ ALARQLSTAA DLGQVLEAGR RALATALDAD
VWLRLEQRES DAPTSFGALD RSAADWTQRH GQPAGRFTDT LAGAQWWCLP VRHERGTLGV
AALRFRQGVQ RPGLEQRRLA EAMVEDIGQA ALRTRLVADL EGARVSGETE RLRSALLSSV
SHDLRSPLAS MIGSASSLAS YGDAMDAHDR HSLLDTIQLE GERLDRYIQN LLDMTRLGHT
GLTVNRDWIG VDELIGSATR RLQRYQPDVR LQLDLAADLP AIWVHPALVE QAIFNVLENA
AKFSPPGIAV TVQATLRSGA LQIDIGDQGP GIPEDERARI FDMFYSVERG DRGRNGTGLG
LAICQGMIGA HGGSVEALAG AHGHGTTIRI TLPLLVPAAP PRPDAD
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