| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04365 |
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| Symbol | ddl |
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| ID | 6304571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1063286 |
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| End bp | 1064242 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642638346 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001912228 |
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| Protein GI | 188575299 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.628824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGG TCATCGCCAA TGCCCGCACC AGCGATCCGG CCATCTTTGG CCGCGTCGCC
GTGTTGCTCG GCGGCACTTC GTCCGAGCGC GAGGTGTCCT TGAACTCCGG CAGCAACGTG
CTGGAAGCGC TGCGTGCGCG CGGCGTCGAT GCGCAGCCGG TCGATGGCAT TGCGGCACTG
GCCAAGGCGT TGGTCGCGCA GCAGTTTGAT CGCGTGTTCA ATGTGCTGCA CGGCCATAAC
GGCGGCGGCG AAGACGGCAT CGTGCAGGGC CTGATGGAAG CTTTCGGCGT GCCGTATACC
GGCTCGGATG TGCTTGGCTC GGCGTTGAGC ATGGACAAGA TCCGTACCAA ACAGGTGTGG
CTGTCGCTGG GCCTGTCGAC ACCGCGTTAC GCGCGGTTGG CTGCTGGCGC CAGCGCCGCG
GACATTCATG CCGCGGCACA ACAGCTCGGT TTACCGGTCA TCGTCAAGCC GGCCAATGAA
GGCTCAAGCG TTGGCGTCAG CCGCGTGTTC GACCAGGCAC AGCTCGAAGA CGCAGTGACC
CTGGCTGCCC GCTACGACGG TGCGCTGTTG ATGGAGCAGT TGATCGAAGG CGACGAACTG
ACCGTTGCGG TGCTCGGCGA CACCGCGTTG CCGTCCATCC GCATCGTGCC CAAGGGCCAG
TGGTACGACT ACAACGCCAA GTACATCGCC GAAGACACGC AGTATCTGTG CCCGGGCCTG
GAAGGCGAGC CCGAAGCGCA GATCCGCCAA CTTGCGCTCG ATGCGTTCCG CGCTGCCGGC
TGCCGTGGCT GGGGCCGCGT GGACGTGATG CGCGATGGCA GCAGCGGCCA GCTGTATCTG
CTCGAAGTGA ACACCGCTCC CGGCATGACC AGCCACTCGC TGGTGCCCAA GGCCGCCCGC
CAGCTCGGCA TCGATTTCGA AGAACTGGTC TGGCGCGTGC TGGAGCAGAC GCTGTGA
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| Protein sequence | MSAVIANART SDPAIFGRVA VLLGGTSSER EVSLNSGSNV LEALRARGVD AQPVDGIAAL
AKALVAQQFD RVFNVLHGHN GGGEDGIVQG LMEAFGVPYT GSDVLGSALS MDKIRTKQVW
LSLGLSTPRY ARLAAGASAA DIHAAAQQLG LPVIVKPANE GSSVGVSRVF DQAQLEDAVT
LAARYDGALL MEQLIEGDEL TVAVLGDTAL PSIRIVPKGQ WYDYNAKYIA EDTQYLCPGL
EGEPEAQIRQ LALDAFRAAG CRGWGRVDVM RDGSSGQLYL LEVNTAPGMT SHSLVPKAAR
QLGIDFEELV WRVLEQTL
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