Gene PXO_04327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04327 
SymbolpgaB 
ID6304476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp969517 
End bp971391 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content63% 
IMG OID642638253 
Productbiofilm PGA synthesis lipoprotein PgaB 
Protein accessionYP_001912135 
Protein GI188575206 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.215859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTAC TTGTGTTGGC TCTGCTGATG TCGATCCTGC CCGTGCAGGC CAAGTCGCCG 
GTCGACCCGG ATGCCGTCGA CAATGGCCTG CTGGTCCTGA GCTACCACGA CATCCGCGAC
GATGTGCGCG AGAACGCCGA TGCCGATGCC TTTGCAGTCA GCACCCAGAA CTTCGCCGCG
CACCTGGACT GGCTGTCGGC GCACGACTAC CACCCCATTT CGCTCTCGCA ACTGATCAAG
GCCTCGCAGG GCAAAGCAAC ACTGCCGCCG CGGGCGGTGC TGCTCACCTT CGACGACGGA
CTGCGCAGCA TGTACACCCG CGTCTATCCG CTACTGCGCG CCTATCACTA TCCGGCGCTG
GTGGCGGTGA TCACCGACTA CGTGGACATG GCGCCTGATC GCACCATCGA CTATGGCTAC
CGCCCGTTCG GCCACGACGA TTTCCTCACC TGGGACCAAT TGCGCGAGAT GCTGGCCAGC
GGCCTGATCG AAGTGGCCAG CCATACCGAC AACCTGCATC ACGGGGTGCA GTCCAATCCG
TACGGTAACC AGGCCCCGGC GGTGAATACC CGGATCTACG ACCCCACGAC ACAACGTTAC
GAGGACGTCG GGCAATACGC CGAGCGCCTG CGCCAGGACC TCGCCCGCAG CGTGGAACGC
ATCGAGCATC AGCTTGGCGT GCGCCCACGG GCGATCGTGT GGCCATATGC GGCCTACAAC
CAGATGAGCA ACGACATCGC CGAGCAACTC GGCATGCCGG TCTCCTTCGA TCTGGAAGGC
CGTAGCACGC CGGTCACTCA CGACCTGCAT GGCCTGGCAC GCCTGCTGGT GACCAACAAT
CCGACCGTGA CAGGACTGGC GTTCGAACTG CGTCGCAACC CTGCACTGGA TGGAACGCGC
GCGCTGCAGA TCGATCTCGA TTCGCTCTAC GACAGCGATC CGGCGCAGCA GGCCCGCAAC
CTGGACACGC TGATCGACAG GGTCAAACGC ATCGGCCCGA CCCACGTCTA TCTGCAGGCC
TTCGCCGATC CGGACGGTAA CAACACCGCC AGTGCGCTGT ACTTCCCCAA CCGGCACATG
CCGATGCGCG AGGATCTGTT CAATCGCGTC GCCTGGCAGT TGAAGACTCG TGCCGGAGTG
AAGGTCTACG CCTGGCTGCC GGTGCTCGGC TATGAACTGC CCGACCTGAA GCAACGCGAG
GCACTGCGCA TCCACAGTAC CGAACGCGAC GGCATGTACC GCCTGGATTT CACAAACCCG
CAGGCACGGC AGATCATCAA GGACATCTAC GAAGACCTGG CCATTAACTC GTACATGGAA
GGCATTTTGT TCCATGACGA TGGCTACCTG CGCGACACCG AATTACCGCA GTTACCGCAG
GAAGGCCACG ACGGTCTCCG CACCCAGGCG CTGATCGACT TCACTATGGA ACTGCGCGAC
AGCGCGCAAC GCTGGCGGCC GAAGCTGGGC ACGGTGCGCA ATCTTTACGC ACAACCGGTC
CTGCAACCGC AGAGCGCCGC CTGGTTCGCC CAACGCCTGG ATCTGTTCAA CCGGGCCTAT
GACCGTACCG CCCTGATGGC CATGCCGTGG ATGGAGGGCA GCCACGACCC GGAACGCTGG
CTGGACACTC TGGTGTCGGC CGTCCGCGCG CAAGACCCGG AAATGAAACA CACCCTGTTC
GAACTGCAGA CGGTGGACTG GCACACCCAG ACGCCGATCA GCGGCGAGCG CTTGATCGCG
CAGATCCACC GCCTGCAGTC GCAGGGCGTG CGCCATTTTG CGTGGTATCC GGATGACTTC
ATCGGCAACA GGCCGTCGAC GGAGGACGCA CGAGCGGCGA TGTCCGCGCG CAACTTCCCT
TACCCGGACA AGTGA
 
Protein sequence
MRVLVLALLM SILPVQAKSP VDPDAVDNGL LVLSYHDIRD DVRENADADA FAVSTQNFAA 
HLDWLSAHDY HPISLSQLIK ASQGKATLPP RAVLLTFDDG LRSMYTRVYP LLRAYHYPAL
VAVITDYVDM APDRTIDYGY RPFGHDDFLT WDQLREMLAS GLIEVASHTD NLHHGVQSNP
YGNQAPAVNT RIYDPTTQRY EDVGQYAERL RQDLARSVER IEHQLGVRPR AIVWPYAAYN
QMSNDIAEQL GMPVSFDLEG RSTPVTHDLH GLARLLVTNN PTVTGLAFEL RRNPALDGTR
ALQIDLDSLY DSDPAQQARN LDTLIDRVKR IGPTHVYLQA FADPDGNNTA SALYFPNRHM
PMREDLFNRV AWQLKTRAGV KVYAWLPVLG YELPDLKQRE ALRIHSTERD GMYRLDFTNP
QARQIIKDIY EDLAINSYME GILFHDDGYL RDTELPQLPQ EGHDGLRTQA LIDFTMELRD
SAQRWRPKLG TVRNLYAQPV LQPQSAAWFA QRLDLFNRAY DRTALMAMPW MEGSHDPERW
LDTLVSAVRA QDPEMKHTLF ELQTVDWHTQ TPISGERLIA QIHRLQSQGV RHFAWYPDDF
IGNRPSTEDA RAAMSARNFP YPDK