Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04301 |
Symbol | gnd |
ID | 6304450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 939114 |
End bp | 940055 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642638228 |
Product | 6-phosphogluconate dehydrogenase-like protein |
Protein accession | YP_001912110 |
Protein GI | 188575181 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTGG GTATGGTGGG ACTGGGCCGC ATGGGCGCCA ATATGGCCGA GCGCCTGATC AACGGCGGGC ATCGCGTGCA TGGCTACGAC CCGGGCGCGA ACGCGCGCAC CAGCGCGCAG GCCAAGGGCA TTGTGACGGC CGATGCGCTG GCAGCGCTGG TGTCCGCATT GCCGACCCCG CGCGTGGTGT GGTTGATGGT GCCGGCGGGC AAGATCGTCG ATGACACCCT GGCGCAGCTG CTCCCTTTGC TGCAGACCGG CGACATCGTC ATTGATGGCG GTAATTCGTA TTACAAGGAT TCGCAGCGTC GTGCAGCGCT GCTGCAGGCC AGCGGCATTG CCTTCGTCGA CTGCGGCACC AGCGGCGGTG TTTGGGGTCT GCAGGAAGGC TACAGTTTGA TGGTGGGTGG CGACGAAGCA GCGGTGACTG CGTTGCATCC GATCCTGGCA ACGCTTGCGC CAGCGCCGGA CAAGGGCTGG GGACGGGTCG GCCCAAGCGG TGCCGGCCAC TTCACCAAGA TGGTCCATAA CGGCATCGAA TACGGAATGA TGCAGGCCTA TGCCGAAGGC TTCGCGCTGA TGCAGCACAA GACCGATTTC GCGCTGGACC TGCACCAGGT CGCCGAGATC TGGCGCGACG GCAGCGTGGT GCGTTCGTGG TTGCTGGATC TCACGGCCGA TGCGTTGACG CATAACCCGA CCATGGCCGG CATCGCGCCG TTCGTGGCAG ATTCGGGCGA AGGCCGCTGG ACGGTGGCCG AGGCGATCGA TCTGGAAGTC TCGGCACCGG TCATCACCTT GTCGCTAATG GAGCGGTTGC GCTCGCGCGA CAAGGATTCG TTTACCGACA AACTGCTGGC GGCGATGCGC AATCAGTTCG GTGGCCACGC CGTGATGACC ACGACCTCTG CAGTACCGAC GATCGGCAGC AAGGACGCGT AA
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Protein sequence | MELGMVGLGR MGANMAERLI NGGHRVHGYD PGANARTSAQ AKGIVTADAL AALVSALPTP RVVWLMVPAG KIVDDTLAQL LPLLQTGDIV IDGGNSYYKD SQRRAALLQA SGIAFVDCGT SGGVWGLQEG YSLMVGGDEA AVTALHPILA TLAPAPDKGW GRVGPSGAGH FTKMVHNGIE YGMMQAYAEG FALMQHKTDF ALDLHQVAEI WRDGSVVRSW LLDLTADALT HNPTMAGIAP FVADSGEGRW TVAEAIDLEV SAPVITLSLM ERLRSRDKDS FTDKLLAAMR NQFGGHAVMT TTSAVPTIGS KDA
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