Gene PXO_04288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04288 
SymbollipB 
ID6304437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp925859 
End bp926533 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID642638215 
Productlipoate-protein ligase B 
Protein accessionYP_001912097 
Protein GI188575168 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGAGCT CTGCGGTCGG CCTGCCTGCG CAGTTGCGCG ATCTTGGTCA TCAGAGCTAC 
GGCCCGGTGT GGCGTGCAAT GCAGCGTTTC ACCGATGCGC GCGATGAGCG CACCGCCGAC 
GAGGTCTGGG TCGTCGAGCA TGCGCCGGTG TTTACGCTGG GCCAGGCCGG CAAACCCGAG 
CACGTGCTGG CGCCCGGCGA TATTCCGGTG CTGCAGGTTG ATCGTGGCGG GCAAGTCACG 
TATCACGGCC CTGGCCAATT GGTCGTTTAC CCGCTGCTGG ATCTGCGTCG GCTCAAGATC 
GGTGTGCGCG ATTACGTGTG CAAGATCGAG CAGGCACTGA TCGGCATGCT GGACGAATGG 
AACATCGTGG CCGAGCGTCG CGACGGTGCC CCCGGCGTTT ATGTAGGTGG GGCCAAGATC 
GCTGCGCTCG GCATCCGCGT GCGGCGTGGC TGCACTTTCC ACGGGTTGTC GTTGAACGTG 
GACATGGATC TGGAGCCGTT TCACCGCATC AATCCCTGTG GCTACCAGGG CCTGCAGGTG 
ACCTCGGTGC TAGACTTGGG CGGCCCCTCC GGGATGGACG CCGTCAAGGC GGTGCTGCTT 
GAGCAACTGG CGCGCCAGTT CGGCCTCGTG CTGCAGCCCG CTTCCGCATT GCCCGACCTT 
TCGCTTCCGG CCTGA
 
Protein sequence
MRSSAVGLPA QLRDLGHQSY GPVWRAMQRF TDARDERTAD EVWVVEHAPV FTLGQAGKPE 
HVLAPGDIPV LQVDRGGQVT YHGPGQLVVY PLLDLRRLKI GVRDYVCKIE QALIGMLDEW 
NIVAERRDGA PGVYVGGAKI AALGIRVRRG CTFHGLSLNV DMDLEPFHRI NPCGYQGLQV 
TSVLDLGGPS GMDAVKAVLL EQLARQFGLV LQPASALPDL SLPA