Gene PXO_04260 details

Gene Information

• Locus tag: PXO_04260
• Symbol: mreD
• ID: 6304421
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 907010
• End bp: 907495
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642638199
• Product: rod shape-determining protein MreD
• Protein accession: YP_001912081
• Protein GI: 188575152
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2891] Cell shape-determining protein
• TIGRFAM ID: [TIGR03426] rod shape-determining protein MreD

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.360557
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCGCA TGCGCAACAC CTGGATCCTG CCAGCGAGCA TCTTCATCGC ATTGGTACTG 
GGTCTGCTGC CGTTGCCGAC GGTGGTGCAG CCGTTGCGGC CGTACTGGCT GGCGCTGGTA 
CTGGCGTATT GGGTGATCGA GGAGCCGGAT CGGGTTGGGC TGGGCCTGGC CTTCGTGGCC 
GGCGTGCTGG CCGACCTGCT GTATGGCGGG TTGCTCGGCG AGCAGGCGCT GCGGCTGGTG 
ATCATGACCT TCATCCTGCA GCGCTTCCGC GCGCGGATGC GCTTCTTCCC GATGTCGCAG 
CAGGCGCTGG CGATCGGCGG GCTGCTGCTC AACGACCGCA TCGTGTCCTC GGCGGTGCAT 
TTGGCCGTGG GCGAGCCGAC CTTGCCGTGG AGCTACTGGT GGGCGCCGCT GCTGGGCATA 
GTGTTATGGC CGCCGCTGTT TGTGGTGCTG GATGCGGTGC GGCTGGGCAA GCGGAGCAAG 
AAGTAA 

 

Protein sequence

MTRMRNTWIL PASIFIALVL GLLPLPTVVQ PLRPYWLALV LAYWVIEEPD RVGLGLAFVA 
GVLADLLYGG LLGEQALRLV IMTFILQRFR ARMRFFPMSQ QALAIGGLLL NDRIVSSAVH 
LAVGEPTLPW SYWWAPLLGI VLWPPLFVVL DAVRLGKRSK K