Gene PXO_04109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04109 
Symbol 
ID6304258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp753518 
End bp754480 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content63% 
IMG OID642638036 
ProductISXo2 putative transposase 
Protein accessionYP_001911918 
Protein GI188574989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.933255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATCA ATCTCGTGCA GTTTCAGCCA GGCTTGTCGC TGAGCGAGTT CATGGATCGC 
TACGGAACCG AAGCCAAGTG TTACCGGGCG TTGTATCGGT GGCGCTGGCC GAAGGGATTT
CGCTGCCCGC AGTGCGGCGG CCGCGCGCGC TCGCGCTTTC GACGCGATGA TCAGGTGTAC
TACCAGTGCC GGGGGTGCCG GCATCAAACC ACCTTGCGTG CCGGCACGCT GTTGCAATCC
AGCAAGCTGT CTTTGCGCCT GTGGATGCAG GCGATGTACC TGTTGACCTC CAGCAAGACC
AACCTGGCAG CACTGGAGTT GAAGCGGCAT CTTGGGGTGA CCTACAAGGC GGCCTGGCGC
ATGAAGCACA AGATCATGCA GGCGATGACC GAGCGCGAAG AACCGCGAAA ACTCAAGGGA
TTCGTGCAGA TCGATGACGC GTATCTGGGC GGTGAACGCA GCGGCGGCAA GCGCGGACGA
GGTTCGGAGA ACAAACAGCC GTTCGTGATC GCGGTGCAAG TGGACCACAG CCACGAACAC
CCCGTCTTTG CGGTGATCGA GCCGGTGAAG GCCTTTGACA ACGCCTCGCT GGAGGACTGG
ATCGCGCGCC GTCTGGAGCC GGAGTGTGAG GTCTATAGCG ACGGCCTGGC GTGCTTTCGC
CGTCTGGAGG AGGCCGGGCA TGCCCACACC ACGCTCGATA CCGGCGGCGG TCGTGCTGCA
ACCGACGTCC AGGGAGCACG TTGGTTGAAT GTGGTGCTGG GCAATGTCAA ACGCGCCATC
AGCGGGACCT ACCATGCGGT GGGCCAGGCC AAGTATGCAA GGCGCTACCT GGCCGAGGCG
GCCTATCGCT TCAACCGCCG ATTCGACCTG AAACAGATGC TGCCGCGGCT GGCGACGGCG
CTGCTGCGCG GCACACCTTG CCCAGAGCGC GTTTTGCGTA TGGCAAGCAA CTTCCATGGC
TGA
 
Protein sequence
MGINLVQFQP GLSLSEFMDR YGTEAKCYRA LYRWRWPKGF RCPQCGGRAR SRFRRDDQVY 
YQCRGCRHQT TLRAGTLLQS SKLSLRLWMQ AMYLLTSSKT NLAALELKRH LGVTYKAAWR
MKHKIMQAMT EREEPRKLKG FVQIDDAYLG GERSGGKRGR GSENKQPFVI AVQVDHSHEH
PVFAVIEPVK AFDNASLEDW IARRLEPECE VYSDGLACFR RLEEAGHAHT TLDTGGGRAA
TDVQGARWLN VVLGNVKRAI SGTYHAVGQA KYARRYLAEA AYRFNRRFDL KQMLPRLATA
LLRGTPCPER VLRMASNFHG