Gene PXO_04071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04071 
Symbol 
ID6304216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp718622 
End bp719896 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content57% 
IMG OID642637997 
Productsite-specific recombinase, phage integrase family 
Protein accessionYP_001911879 
Protein GI188574950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0594853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAACG TTGGATGCGA TAAACGCATC TCTTGGCCTT GTCACTGCAG CAAATCAAGA 
ACAGCACCAA GACGAGGATC TCATCTGATG GCGCGGGGAC GTAAACGGAG GTTCAACCCG
AATATTCCAG GTCACATCGA GCAGGAGGCG CTCCCTAAAG GCATCTACTG GGAGAACGGC
CGCTGGTACA TGCATGAAGA CCATCCGGAC GGTGGCCGAC AAGTGAAGCG TACGGTCGCC
TTTCGAAGTG CTCGTCTCTC TGAACTCCAT GCAATCGCAG AATCTCGACT ACGAGGGGAC
GTGCGTGGCA CGCTGCGTTA CCTCTTCGAC CGTTTCCACG AAGCGAGCGA ATTTAAGGAA
CTACAGCATG ACACGCAGAA GGATTACCGA CGCTACGCTG ATACGCTTGC CAACTATGTC
CGCAAGGATG GGTCCAAGCT CGGTGGTGTG CAGTTGGAAC ACATCACTAC GCCCGTGGTG
CAGCGGCTGC TTGAGACCTT TGCAAACGGG AGACCGGCTA CTCGCCTGCA GCAGGCGCTT
CCTCCAACGC CTAGCAAGGC CAATCATCTG TATCGCTACC TCCGGCGAAC ACTCGCGTGG
GGGGTGCGCC ATGGCTACTG CAAGGAGAAT CCTGCAATTG GTGTTCTCCA GGCGAAGGAG
GCTAAGGCCT TCAGGATGCC TACGCCTGAT GCGTTCGAGG CTGTTCTACA GTTCGCCCGC
GAGCGCGGCG CTTTAAAGCC TCACACCAAA GGTAGCTTTC CCAGCTATCT CCCCCCAGTC
ATGGTGCTGG CATACAGCGC CAGGCTGCGC GGTATCGAAG TTTGCTCACT CACTGACGCA
CATCGGCTAG AACACGGCGT GCACGCGTCA CGTAGAAAGG GATCGCGCGA CACACTCACC
ACGTGGGACG CCCACATGAC GGAAGCATGG GAGGCGTTGC TGGCTCGCCG ATCAGAAATC
TGCAACAAGC CTGGCCGCAA CTTTCCGATA CCAATGAAGC CGGAAGAACG CTTCTTCCTC
ATTGAGCAGA CCGGCAATCC GATTGTCAAG TCGTCACTCG ACAGCGCATG GCAGCGATTC
ATCCCTGCGG CAATACGCGA TGGCGTGATC AAGTCTGAGG AGCGCTTCTC ACTACATGGT
TTGAAGCATC GGGGCGTTAC CGACACCGAG GGCAATCGAG GCGATAAGCA AGATGCAGCT
GGGCACGTCT CGTCGTCGAT GACAGATCGT TACGACCACG AGTTACCGGT CGTGAAACCT
CCACGACGGC GCTGA
 
Protein sequence
MDNVGCDKRI SWPCHCSKSR TAPRRGSHLM ARGRKRRFNP NIPGHIEQEA LPKGIYWENG 
RWYMHEDHPD GGRQVKRTVA FRSARLSELH AIAESRLRGD VRGTLRYLFD RFHEASEFKE
LQHDTQKDYR RYADTLANYV RKDGSKLGGV QLEHITTPVV QRLLETFANG RPATRLQQAL
PPTPSKANHL YRYLRRTLAW GVRHGYCKEN PAIGVLQAKE AKAFRMPTPD AFEAVLQFAR
ERGALKPHTK GSFPSYLPPV MVLAYSARLR GIEVCSLTDA HRLEHGVHAS RRKGSRDTLT
TWDAHMTEAW EALLARRSEI CNKPGRNFPI PMKPEERFFL IEQTGNPIVK SSLDSAWQRF
IPAAIRDGVI KSEERFSLHG LKHRGVTDTE GNRGDKQDAA GHVSSSMTDR YDHELPVVKP
PRRR