| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04057 |
|---|
| Symbol | sun |
|---|
| ID | 6304200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 703050 |
|---|
| End bp | 704363 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642637981 |
|---|
| Product | ribosomal RNA small subunit methyltransferase B |
|---|
| Protein accession | YP_001911864 |
|---|
| Protein GI | 188574935 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCCG AGACCTCAAC CGCCGCCGGC ATCGCCTCGC GCCTGGCCGC CGCACGCGTT
CTGACCGCCG TGTTCGATCA GGGCCGCTCG CTGAAAGCCG AACTGGCTGC GACCTTGCCC
GGTATCGGCG ATCCGCGCGA CCGCGCACTG GTGGAGGCGA TCTGCTTTGC GGTGATCCGC
CGTCGCCCGG CGTATGACGT CGCGCTGCGG CAATGGCTGG AACGGCCGCT GCCGCCCCGC
GATGCAGAAC TCAAGGCGCT GCTGATGGTC GGCTTCGCCC AGCTCGACGT GCTACAACTT
CCCGCGCACG CGGCGTTGTC GGCCACCGTG GATGCATGCC GCGCGCTGGG CCGGCCACGT
CAGGCCGGCA TGGTCAACGC GATCTTGCGA CGCGCCCAGC GCGAAGGGTT TCCGGCGGTA
TCGGATGATG CCGGCTGGCC GTCGTGGCTG CGCAAGCAGG TGCGCGCCGA TTGGGGCGAG
CGTGCAGAAG GCATTTTTAT CGCGAGTGCG CAGATGGCGC CGATGTGGCT GCGTGTGCAG
CATTCGCGGA TCGACCCGGC GGCCTACGTC GCACGGCTGG CCGAACTGGG CATTAGCGCG
CAGACAGACG TGGTGTTGCC GGATGCGGTG CGCCTGCACA GCGCCGTGCC GGTGAGCCAG
TTGCCGGGCT TTGCCGACGG CGATGTTTCG GTGCAGGACG GCTCTGCGCA GCAGGTGGCC
GATGCGCTGA CGCTGGCGCC GTCGGCACGC GTGCTAGATG CCTGCGCCGC GCCGGGCGGC
AAGGCGGCGC ATCTGCTGGA ACGCCATCCC GGGTTGCAGC TCGCCGCGCT TGATGTGGAT
GCGCGTCGCC TGGAGCGCGT GCAGCAGACC TTGCAGCGCA GCGTGCCGAG CGCACAGGTC
GCATTGCAGG CAGCCGACGC CGCCGACACG GATGCATGGT GGGACGGCCA ACCGTTCGAT
GCGGTGTTGC TGGATGCGCC CTGTTCGGCC ACCGGCGTAG TGCGGCGTCA ACCGGATGTG
CTGCTGCACC GGCGTGCCGA CGATATCGAT GCATTGTGCG CGCTGCAGGC GCGGCTGCTG
GATGCGACCT GGCGCACGCT GCGCCCGGGT GGGCAGTTGC TGTACACCAC CTGCTCGCTG
TTGGCGCGCG AGAACCAGAC CCAGGTCGAC GCATTCCTGC AACGCACCCC TGACGCACAG
GCGCAGCCCC TGGGTGCGCA GTTCGGGCAT GCAGCCGGGC CCGGGCGTCA GCGCTTTCCA
GGCGAGCAGC ACTGCGACGG ATTTTTCTAC GCGCTTTTGC TAAAAGCCTC CTGA
|
|---|
| Protein sequence | MSAETSTAAG IASRLAAARV LTAVFDQGRS LKAELAATLP GIGDPRDRAL VEAICFAVIR
RRPAYDVALR QWLERPLPPR DAELKALLMV GFAQLDVLQL PAHAALSATV DACRALGRPR
QAGMVNAILR RAQREGFPAV SDDAGWPSWL RKQVRADWGE RAEGIFIASA QMAPMWLRVQ
HSRIDPAAYV ARLAELGISA QTDVVLPDAV RLHSAVPVSQ LPGFADGDVS VQDGSAQQVA
DALTLAPSAR VLDACAAPGG KAAHLLERHP GLQLAALDVD ARRLERVQQT LQRSVPSAQV
ALQAADAADT DAWWDGQPFD AVLLDAPCSA TGVVRRQPDV LLHRRADDID ALCALQARLL
DATWRTLRPG GQLLYTTCSL LARENQTQVD AFLQRTPDAQ AQPLGAQFGH AAGPGRQRFP
GEQHCDGFFY ALLLKAS
|
|---|
| |