Gene PXO_04043 details

Gene Information

• Locus tag: PXO_04043
• Symbol: sppA
• ID: 6304186
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 687891
• End bp: 689780
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642637967
• Product: signal peptide peptidase SppA, 67K type
• Protein accession: YP_001911850
• Protein GI: 188574921
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0616] Periplasmic serine proteases (ClpP class)
• TIGRFAM ID: [TIGR00705] signal peptide peptidase SppA, 67K type; [TIGR00706] signal peptide peptidase SppA, 36K type

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGTCGCA GTCCCATCGC CAGCTTCTTC GTCGGCCTGT GGGATGTGAT GAATTTCACC 
CGGCGCCTCA TTTTCAACCT GGTGTTCTTC GGTTTCCTGT TTATGCTGCT GCTGGTGTTC 
GTGGTGGCGC TCGCGCGTGG CGACGGCACT AAGCCGCTGG CTGAGCGCAC CACTCTGGTG 
ATCAACCCGG AAGGCACGCT GGTCGAGCAG TTCAGCGCCG ACCCGGTGAG CCGGTCGCTG 
GCCAAGGCAG TGGGCGACAG GAGCGCTCAA GAAGTGCAGC TGCGCGACCT GGTGCGGGTG 
ATCGAGGCGG CCGGCAAAGA TCGCAAGATC GAGCGCGTGC TGTTGAATCT GGACAAATTC 
CAACCGTCCG GTTTCGCCTC GCAGCGCGAA GTGGCCGCTG CGTTGCAGAA GCTGCGTGCC 
TCCGGCAAGC AGATCGTGGC CTTCAGCGAG AGCATGAGCC AGGGCCAGTA CCTGCTCGCC 
GCGCAGGCTA ACGAGGTGTA TCTGGATCCG ATGGGCAGCG TGCTGCTGGA AGGCCTCGGC 
CGCTATCGCC AGTACTTCCG CGAAGGCCTG CAGGACAAGC TCGGCGTGGA CGTGCATTTG 
TTTCGCGTGG GCGAGTACAA GTCCGCCGCC GAGCCGTACA TCCTCGACGC GGCCTCTGCC 
GATGCCAGGG AAGCGGATCT GTTCTGGATG AACGATGTGT GGCAGCGCTA TCTGGCCGAC 
GTGGGCACTG CGCGCAAGCT GAGCCCGGCG CAGCTGACCG CCGGCATCGA CACGCTGCCT 
GAGGGCGTGG CCGCCGCCGG TGGCGACCTG GCCAAGTTCG CGCTGCAGCA GAAGCTGGTG 
GACGGGCTCA AGACCCGCGA GGAAGTCGAT GCGTTGCTGG TCAAGCGCGG CGTGGCCGAT 
AGCGATGCCG AAAGCGGTTT CCGCAACATC GGTTTCAACG ATTATCTGAG CCAGTTGCAG 
GCGCAGGATT CGCCGATGGA CAGCCGCCCG CAGGTGGCGG TGGTGGTGGC GACCGGCGAA 
ATCAGCGGCG GTGAACAGCC GGCCGGTCGC ATCGGTGGCG AGTCCACCGC GGCGCTGCTG 
CGCCAAGCGC GTGACGACGA GAAAGTGAAG GCGGTGGTGC TGCGCGTGGA TTCGCCCGGC 
GGCGAAGTGT TCGCCTCCGA GCAGATCCGC CGCGAAGTGG TCGCACTCAA GCAGGCCGGC 
AAGCCGGTGG TGGTCTCGAT GGGCGATCTG GCCGCTTCCG GCGGTTATTG GATCAGCATG 
AATGCCGATC GCATCTACGC CGACCCGTCG ACCATCAGCG GTTCCATCGG CATCTTCGGC 
ATGGTGCCGA ACCTGACCCG CGCGCTGGAC AAGATTGGCG TGCATACCGA CGGCGTGGGC 
ACCACGCGGT TCGCTGGTGC GTTCGACATC ACCCGGCCGC TGGATCCGGC CGCCGGCCAG 
GTTATCCAGG CGTTGATCAA CAAGGGTTAC GCCGATTTCA CCGGCAAGGT GGCGCAGGCG 
CGCCACCAGT CGGTGGACGC GATCGACAAG GTTGCGCGTG GCCGTGTGTG GAGCGGCGCG 
CAGGCCAAGG AGCGTGGGTT GGTGGATGCG TTCGGCGGCA TGTCCGAAGC GGTGGCCGAT 
GCGGCCGACC GCGCCAAGCT GAGCCGTGGC AAGTTCCGCG TGCGCTATGT GGAAAAGCCG 
GCCACGCCGT TCTCGCAGTT CATGAACGGG TTCGCCGGCA GCCGCATGGG CGCATGGATG 
CTGAGCGACT CGGGCATGGC ACGCGCACTT GTGGCCCGCG CGTTGCCGGA AGTGGACACG 
CAGCTGCGCT TTGTCGAAAG CGCCGTGCAC GACAGCAAGG CGGGTGGCAC GCCGGTGAAA 
TCGCTGGCGT ATTGCTTCTG CGGATTCTGA 

 

Protein sequence

MRRSPIASFF VGLWDVMNFT RRLIFNLVFF GFLFMLLLVF VVALARGDGT KPLAERTTLV 
INPEGTLVEQ FSADPVSRSL AKAVGDRSAQ EVQLRDLVRV IEAAGKDRKI ERVLLNLDKF 
QPSGFASQRE VAAALQKLRA SGKQIVAFSE SMSQGQYLLA AQANEVYLDP MGSVLLEGLG 
RYRQYFREGL QDKLGVDVHL FRVGEYKSAA EPYILDAASA DAREADLFWM NDVWQRYLAD 
VGTARKLSPA QLTAGIDTLP EGVAAAGGDL AKFALQQKLV DGLKTREEVD ALLVKRGVAD 
SDAESGFRNI GFNDYLSQLQ AQDSPMDSRP QVAVVVATGE ISGGEQPAGR IGGESTAALL 
RQARDDEKVK AVVLRVDSPG GEVFASEQIR REVVALKQAG KPVVVSMGDL AASGGYWISM 
NADRIYADPS TISGSIGIFG MVPNLTRALD KIGVHTDGVG TTRFAGAFDI TRPLDPAAGQ 
VIQALINKGY ADFTGKVAQA RHQSVDAIDK VARGRVWSGA QAKERGLVDA FGGMSEAVAD 
AADRAKLSRG KFRVRYVEKP ATPFSQFMNG FAGSRMGAWM LSDSGMARAL VARALPEVDT 
QLRFVESAVH DSKAGGTPVK SLAYCFCGF