Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04017 |
Symbol | |
ID | 6304160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 659088 |
End bp | 662237 |
Gene Length | 3150 bp |
Protein Length | 1049 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642637941 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_001911824 |
Protein GI | 188574895 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCGCCCG AACTGCCCGC CGCACCTGGC GCATTGCGTG CTGCCATTAC CGCCGCCTGG CTCAAGGACG AAACCGAGCA CGTGCGTGAA TTGCTCGACC AGGCACGTCT GCCCGCCGCC GAGCAGGCCA AGGTGCAAGC GATCGCTGCC GATCTGGTCA CCCGCGTGCG TGCCCGTGCG CAGGACCAGG GGGCCATCGA AGCCTTCATG CGCCAGTACG ACCTGGGTAG CGAAGAAGGC GTGCTGCTGA TGTGCGTGGC CGAGGCGCTG CTGCGCATCC CCGACCAGGA TACTGCCGAC AAGCTGATCC GCGACAAGCT CGGCGATGCG GATTGGAAGA AGCACATGGG CGGCAGCGAT TCGCTGCTGG TCAACGCCTC CACCTGGGGC CTGATGCTGA CCGGCCAGTT GGTGCAGCTC AACGACCTCA CCCGCGCCGA TGTGCCGGGA GCCTTCAAGC GCCTGATCGG ACGCGTCGGC GAGCCGGTGA TTCGTCTGGC CGTGCGCCAG GCCATGAAGA TCATGGGCCA CCAGTTCGTC ATGGGCCGCA CCATCGGCGA AGCGTTGTCG CGTTCGCGCA AGGGCGACAA CGCCCACTAC CGCTATTCGT TCGACATGCT CGGCGAAGGC GCGCTCACCA TGAAGGATGC GCAGCGCTAT CTGCAGGCGT ATCGCGACGC GATTCATGCG ATCGGCCGCA GCGGCAACTT CGTTGGTACC GACGTGTTCG CCGCGCCCAG CATTTCGATC AAGTTATCGG CGCTGTATCC GCGTTACGAG CACGCCAAGC GCGCACGCGT GATGGAAGAG CTGGTGCCTG GCGTGCTGGA GCTTGCGCAG TTGGCCAAGT CGTATGGCAT CGGCTACACC GTCGACGCTG AAGAAGCCGA CCGTCTGGAA CTGTCGCTCG ACATCATCGA AGCCACCTTC TCCGATTCGT CGTTGGATGG ATGGGAAGGC TATGGCCTGG CAGTGCAGGC GTATCAAAAA CGCACGCCGT ACACGATCGA TTTTCTTGCA GATCTCGCGC GCCGCGTCGG GCGACGTATT CCGGTGCGCC TGGTCAAAGG CGCGTATTGG GACGCGGAAA TCAAGCGCGC GCAAATCGAA GGGCATCCCG GCTACCCGGT GTTTACCCGC AAGCAAAATA CCGACGTGTC GTATCTGGCC TGCGCACGTC GCATGTTCGC GCACAATGAC GCGCTCTATC CGATGTTCGC CACGCATAAC GCGCAGACCA TTGCGGCGGT GCGTGCGATT GCAGCAGGCA AGACTTACGA GCATCAGAAA CTGCACGGCA TGGGCGATGA CCTGTATGCC GAAGTGATTC CAGCCGATCG TCTCGGCCTG CCATGCCGCG TGTACGCCCC GGTCGGCTCA CACGAAGATC TGCTGCCCTA TCTGGTGCGT CGCCTGCTCG AAAACGGCGC CAATTCCAGC TTCGTCAATC GCATCACCGA CGAGGATGTC GCCATCGAAG ACCTCATCCG CGACCCAGTT GAGGCGGTGT CGTCGTTCAC TTCCATTCCG CATCCCAAGA TTCCACTGCC GGCCGATTTG CTGCGTAGTC AGAACCAGAA CAGGAAAAAC TCCATGGGCG CCAATCTCGC CAACGACAAC GATCTGCGCC AGCTGGCCGA GCAACTCAAC GCCGCGATCA AACCCTGGAA AGCGACGCCT TTGGTGCCTG GTGCGCTTAT CAGCACGCCC AGCCAACCGG TACTGAATCC GGCGGATCGC CGGGAGACGG TTGGGCAGTG GCACCCGGCT GATCCGGACA CCGTGCAGAC GTCGCTGGCC AGCGCTGCAG CCGCGCAACC TGGCTGGAAC CGCACACCTG CAGCGAGCCG CGCCACTATC CTGGAACATG CGGCCGATCT GCTCGAAGCG CGCATGCCCG AATTCATGGC GATCTGTGTC AAGGAAGCCG GCAAGACGCT GCCGGACGCA GTGGCCGAAG TCCGCGAGGC GGTGGATTTC CTGCGCTACT ACGCCGGTCA GGCGCGCGCA CAGTTCGGCG CACCCGAGCG CCTACCCGGG CCGACCGGCG AATCCAACGA GCTGCAGCTG CACGGGCGTG GCGTCTTCGT CTGCATCAGT CCGTGGAACT TCCCGTTGGC GATCTTCCTC GGCCAGGTCG CCGCAGCGCT GGCGGCCGGC AACACGGTTA TCGCCAAACC GGCCGAGCAG ACCAACCTGA TCGGCTTTGC AGCGGTCAAG TTGCTGCACG AAGCTGGCGT ACCGGAAGCG GCTGTACAGT TCCTGCCAGG TGACGGCGCT ACCGTTGGTG CTGCGCTGAC CAACGACCCG CGCGTTGCCG GCGTTGCATT CACCGGTTCT ACCGAAACCG CACGCATCAT CAACCGCACC CTGGCCGCAC GCGATGCCGC CATCGGCGTG TTGATCGCCG AAACCGGCGG CCAGAACGCC TTCATCGCCG ACTCGTCTTC GCTGCCCGAA GCAGTAGTCA AAGACGCGAT CGCTAGTGCT TTCATCTCGG CCGGGCAGCG CTGCTCCGCG GCGCGCGTCC TGTTCGTCCA GGACGACATC GCCGACAAGG TCATGACGAT GCTGGCCGGT GCGATGGGCG AGTTGAAGAT CGGCGATCCG AGCCTGCTCT CAACCGACGT CGGCCCCGTG ATCGACGCCG ATGCGCTCAA GATTCTCGAC GATCACGCTG CACGCATGGA TCGCGAAGCG CGCCTGATCG GAAGCACTAC GCTGGCGACG ACCACGGCGC ATGGCAGCTT CTTCGCTGCA CGCGCCTACG AACTGACGTC GCTAGCCCAG CTGCAGCGCG AAATTTTCGG GCCGGTGCTG CACGTGATTC GCTGGAAAGC CGATCAGCTC GACGCCGTCA TCGAGCAGAT CAACGCAACC GGTTATGGCC TCACCCTGGG TGTGCATTCG CGTATCGACG AAACCATCGA ACGCATCACC TCGCGCGTGG CGGTCGGTAA CGTCTACGTC AATCGCAACC AGATCGGTGC CGTGGTCGGC GTACAACCCT TCGGCGGTCA GGGCCTGTCC GGCACCGGTC CCAAGGCCGG CGGCCCGCAT TACCTGCTGC GCTTTGCGAC AGAGAAGGTC GTCACCGTCA ACACCACTGC AGCCGGTGGC AATGCCTCGC TGCTGACATT GGGCGATTGA
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Protein sequence | MAPELPAAPG ALRAAITAAW LKDETEHVRE LLDQARLPAA EQAKVQAIAA DLVTRVRARA QDQGAIEAFM RQYDLGSEEG VLLMCVAEAL LRIPDQDTAD KLIRDKLGDA DWKKHMGGSD SLLVNASTWG LMLTGQLVQL NDLTRADVPG AFKRLIGRVG EPVIRLAVRQ AMKIMGHQFV MGRTIGEALS RSRKGDNAHY RYSFDMLGEG ALTMKDAQRY LQAYRDAIHA IGRSGNFVGT DVFAAPSISI KLSALYPRYE HAKRARVMEE LVPGVLELAQ LAKSYGIGYT VDAEEADRLE LSLDIIEATF SDSSLDGWEG YGLAVQAYQK RTPYTIDFLA DLARRVGRRI PVRLVKGAYW DAEIKRAQIE GHPGYPVFTR KQNTDVSYLA CARRMFAHND ALYPMFATHN AQTIAAVRAI AAGKTYEHQK LHGMGDDLYA EVIPADRLGL PCRVYAPVGS HEDLLPYLVR RLLENGANSS FVNRITDEDV AIEDLIRDPV EAVSSFTSIP HPKIPLPADL LRSQNQNRKN SMGANLANDN DLRQLAEQLN AAIKPWKATP LVPGALISTP SQPVLNPADR RETVGQWHPA DPDTVQTSLA SAAAAQPGWN RTPAASRATI LEHAADLLEA RMPEFMAICV KEAGKTLPDA VAEVREAVDF LRYYAGQARA QFGAPERLPG PTGESNELQL HGRGVFVCIS PWNFPLAIFL GQVAAALAAG NTVIAKPAEQ TNLIGFAAVK LLHEAGVPEA AVQFLPGDGA TVGAALTNDP RVAGVAFTGS TETARIINRT LAARDAAIGV LIAETGGQNA FIADSSSLPE AVVKDAIASA FISAGQRCSA ARVLFVQDDI ADKVMTMLAG AMGELKIGDP SLLSTDVGPV IDADALKILD DHAARMDREA RLIGSTTLAT TTAHGSFFAA RAYELTSLAQ LQREIFGPVL HVIRWKADQL DAVIEQINAT GYGLTLGVHS RIDETIERIT SRVAVGNVYV NRNQIGAVVG VQPFGGQGLS GTGPKAGGPH YLLRFATEKV VTVNTTAAGG NASLLTLGD
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