Gene PXO_04017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04017 
Symbol 
ID6304160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp659088 
End bp662237 
Gene Length3150 bp 
Protein Length1049 aa 
Translation table11 
GC content64% 
IMG OID642637941 
Productbifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 
Protein accessionYP_001911824 
Protein GI188574895 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase 
TIGRFAM ID[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGCCCG AACTGCCCGC CGCACCTGGC GCATTGCGTG CTGCCATTAC CGCCGCCTGG 
CTCAAGGACG AAACCGAGCA CGTGCGTGAA TTGCTCGACC AGGCACGTCT GCCCGCCGCC
GAGCAGGCCA AGGTGCAAGC GATCGCTGCC GATCTGGTCA CCCGCGTGCG TGCCCGTGCG
CAGGACCAGG GGGCCATCGA AGCCTTCATG CGCCAGTACG ACCTGGGTAG CGAAGAAGGC
GTGCTGCTGA TGTGCGTGGC CGAGGCGCTG CTGCGCATCC CCGACCAGGA TACTGCCGAC
AAGCTGATCC GCGACAAGCT CGGCGATGCG GATTGGAAGA AGCACATGGG CGGCAGCGAT
TCGCTGCTGG TCAACGCCTC CACCTGGGGC CTGATGCTGA CCGGCCAGTT GGTGCAGCTC
AACGACCTCA CCCGCGCCGA TGTGCCGGGA GCCTTCAAGC GCCTGATCGG ACGCGTCGGC
GAGCCGGTGA TTCGTCTGGC CGTGCGCCAG GCCATGAAGA TCATGGGCCA CCAGTTCGTC
ATGGGCCGCA CCATCGGCGA AGCGTTGTCG CGTTCGCGCA AGGGCGACAA CGCCCACTAC
CGCTATTCGT TCGACATGCT CGGCGAAGGC GCGCTCACCA TGAAGGATGC GCAGCGCTAT
CTGCAGGCGT ATCGCGACGC GATTCATGCG ATCGGCCGCA GCGGCAACTT CGTTGGTACC
GACGTGTTCG CCGCGCCCAG CATTTCGATC AAGTTATCGG CGCTGTATCC GCGTTACGAG
CACGCCAAGC GCGCACGCGT GATGGAAGAG CTGGTGCCTG GCGTGCTGGA GCTTGCGCAG
TTGGCCAAGT CGTATGGCAT CGGCTACACC GTCGACGCTG AAGAAGCCGA CCGTCTGGAA
CTGTCGCTCG ACATCATCGA AGCCACCTTC TCCGATTCGT CGTTGGATGG ATGGGAAGGC
TATGGCCTGG CAGTGCAGGC GTATCAAAAA CGCACGCCGT ACACGATCGA TTTTCTTGCA
GATCTCGCGC GCCGCGTCGG GCGACGTATT CCGGTGCGCC TGGTCAAAGG CGCGTATTGG
GACGCGGAAA TCAAGCGCGC GCAAATCGAA GGGCATCCCG GCTACCCGGT GTTTACCCGC
AAGCAAAATA CCGACGTGTC GTATCTGGCC TGCGCACGTC GCATGTTCGC GCACAATGAC
GCGCTCTATC CGATGTTCGC CACGCATAAC GCGCAGACCA TTGCGGCGGT GCGTGCGATT
GCAGCAGGCA AGACTTACGA GCATCAGAAA CTGCACGGCA TGGGCGATGA CCTGTATGCC
GAAGTGATTC CAGCCGATCG TCTCGGCCTG CCATGCCGCG TGTACGCCCC GGTCGGCTCA
CACGAAGATC TGCTGCCCTA TCTGGTGCGT CGCCTGCTCG AAAACGGCGC CAATTCCAGC
TTCGTCAATC GCATCACCGA CGAGGATGTC GCCATCGAAG ACCTCATCCG CGACCCAGTT
GAGGCGGTGT CGTCGTTCAC TTCCATTCCG CATCCCAAGA TTCCACTGCC GGCCGATTTG
CTGCGTAGTC AGAACCAGAA CAGGAAAAAC TCCATGGGCG CCAATCTCGC CAACGACAAC
GATCTGCGCC AGCTGGCCGA GCAACTCAAC GCCGCGATCA AACCCTGGAA AGCGACGCCT
TTGGTGCCTG GTGCGCTTAT CAGCACGCCC AGCCAACCGG TACTGAATCC GGCGGATCGC
CGGGAGACGG TTGGGCAGTG GCACCCGGCT GATCCGGACA CCGTGCAGAC GTCGCTGGCC
AGCGCTGCAG CCGCGCAACC TGGCTGGAAC CGCACACCTG CAGCGAGCCG CGCCACTATC
CTGGAACATG CGGCCGATCT GCTCGAAGCG CGCATGCCCG AATTCATGGC GATCTGTGTC
AAGGAAGCCG GCAAGACGCT GCCGGACGCA GTGGCCGAAG TCCGCGAGGC GGTGGATTTC
CTGCGCTACT ACGCCGGTCA GGCGCGCGCA CAGTTCGGCG CACCCGAGCG CCTACCCGGG
CCGACCGGCG AATCCAACGA GCTGCAGCTG CACGGGCGTG GCGTCTTCGT CTGCATCAGT
CCGTGGAACT TCCCGTTGGC GATCTTCCTC GGCCAGGTCG CCGCAGCGCT GGCGGCCGGC
AACACGGTTA TCGCCAAACC GGCCGAGCAG ACCAACCTGA TCGGCTTTGC AGCGGTCAAG
TTGCTGCACG AAGCTGGCGT ACCGGAAGCG GCTGTACAGT TCCTGCCAGG TGACGGCGCT
ACCGTTGGTG CTGCGCTGAC CAACGACCCG CGCGTTGCCG GCGTTGCATT CACCGGTTCT
ACCGAAACCG CACGCATCAT CAACCGCACC CTGGCCGCAC GCGATGCCGC CATCGGCGTG
TTGATCGCCG AAACCGGCGG CCAGAACGCC TTCATCGCCG ACTCGTCTTC GCTGCCCGAA
GCAGTAGTCA AAGACGCGAT CGCTAGTGCT TTCATCTCGG CCGGGCAGCG CTGCTCCGCG
GCGCGCGTCC TGTTCGTCCA GGACGACATC GCCGACAAGG TCATGACGAT GCTGGCCGGT
GCGATGGGCG AGTTGAAGAT CGGCGATCCG AGCCTGCTCT CAACCGACGT CGGCCCCGTG
ATCGACGCCG ATGCGCTCAA GATTCTCGAC GATCACGCTG CACGCATGGA TCGCGAAGCG
CGCCTGATCG GAAGCACTAC GCTGGCGACG ACCACGGCGC ATGGCAGCTT CTTCGCTGCA
CGCGCCTACG AACTGACGTC GCTAGCCCAG CTGCAGCGCG AAATTTTCGG GCCGGTGCTG
CACGTGATTC GCTGGAAAGC CGATCAGCTC GACGCCGTCA TCGAGCAGAT CAACGCAACC
GGTTATGGCC TCACCCTGGG TGTGCATTCG CGTATCGACG AAACCATCGA ACGCATCACC
TCGCGCGTGG CGGTCGGTAA CGTCTACGTC AATCGCAACC AGATCGGTGC CGTGGTCGGC
GTACAACCCT TCGGCGGTCA GGGCCTGTCC GGCACCGGTC CCAAGGCCGG CGGCCCGCAT
TACCTGCTGC GCTTTGCGAC AGAGAAGGTC GTCACCGTCA ACACCACTGC AGCCGGTGGC
AATGCCTCGC TGCTGACATT GGGCGATTGA
 
Protein sequence
MAPELPAAPG ALRAAITAAW LKDETEHVRE LLDQARLPAA EQAKVQAIAA DLVTRVRARA 
QDQGAIEAFM RQYDLGSEEG VLLMCVAEAL LRIPDQDTAD KLIRDKLGDA DWKKHMGGSD
SLLVNASTWG LMLTGQLVQL NDLTRADVPG AFKRLIGRVG EPVIRLAVRQ AMKIMGHQFV
MGRTIGEALS RSRKGDNAHY RYSFDMLGEG ALTMKDAQRY LQAYRDAIHA IGRSGNFVGT
DVFAAPSISI KLSALYPRYE HAKRARVMEE LVPGVLELAQ LAKSYGIGYT VDAEEADRLE
LSLDIIEATF SDSSLDGWEG YGLAVQAYQK RTPYTIDFLA DLARRVGRRI PVRLVKGAYW
DAEIKRAQIE GHPGYPVFTR KQNTDVSYLA CARRMFAHND ALYPMFATHN AQTIAAVRAI
AAGKTYEHQK LHGMGDDLYA EVIPADRLGL PCRVYAPVGS HEDLLPYLVR RLLENGANSS
FVNRITDEDV AIEDLIRDPV EAVSSFTSIP HPKIPLPADL LRSQNQNRKN SMGANLANDN
DLRQLAEQLN AAIKPWKATP LVPGALISTP SQPVLNPADR RETVGQWHPA DPDTVQTSLA
SAAAAQPGWN RTPAASRATI LEHAADLLEA RMPEFMAICV KEAGKTLPDA VAEVREAVDF
LRYYAGQARA QFGAPERLPG PTGESNELQL HGRGVFVCIS PWNFPLAIFL GQVAAALAAG
NTVIAKPAEQ TNLIGFAAVK LLHEAGVPEA AVQFLPGDGA TVGAALTNDP RVAGVAFTGS
TETARIINRT LAARDAAIGV LIAETGGQNA FIADSSSLPE AVVKDAIASA FISAGQRCSA
ARVLFVQDDI ADKVMTMLAG AMGELKIGDP SLLSTDVGPV IDADALKILD DHAARMDREA
RLIGSTTLAT TTAHGSFFAA RAYELTSLAQ LQREIFGPVL HVIRWKADQL DAVIEQINAT
GYGLTLGVHS RIDETIERIT SRVAVGNVYV NRNQIGAVVG VQPFGGQGLS GTGPKAGGPH
YLLRFATEKV VTVNTTAAGG NASLLTLGD