| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03953 |
|---|
| Symbol | |
|---|
| ID | 6304093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 595571 |
|---|
| End bp | 596473 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642637876 |
|---|
| Product | haloalkane dehalogenase |
|---|
| Protein accession | YP_001911761 |
|---|
| Protein GI | 188574832 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTACC CCGGCTATCC CTTTACCCCG AAGCGCTTTG AGGTGCGACC CGGCGTTGCG
ATGTCGTATC TTGACGAAGG CCCGCGCGAT GGCGAAGTGG TTGTGATGCT GCACGGCAAT
CCGTCATGGA GCTATCTGTG GCGGCATCTG GTGCGCGGCC TGTGCGATCG CTACCGCTGC
ATCGTGCCCG ACCATATCGG CATGGGCTTA TCCGACAAGC CGGACGATGC GCCCGACGCG
CAGCCGCGTT ACGACTACAC GCTGCAATCG CGCGTGGACG ATCTGGACAC CTTGCTGCGG
CATCTGGGCA TCACCGGACC GGTCACGCTG GCGGTGCACG ATTGGGGCGG CATGATCGGG
TTCGGCTGGG CGTTGTCGCA TCACGCCCAG GTCAAGCGGC TGGTCATCAC CAACACCGCT
GCGTTCCCGC TGCCGGCGGA AAAGCCGATG CCATGGCAGA TTGCGATGGG CCGGCACTGG
CGGCTGGGCG AGTGGTTTAT CCGCACGTTC AATGCGTTTT CGTCCGGCGC TTCGTGGTTT
GGCGTCTCGC GGCGCATGCC GGCCGCTGTG CGTCGCGCCT ATGTAGCGCC GTACAACACC
TGGCGCAATC GTATTTCCAC CATCCGCTTC ATGCAGGACA TTCCACTGTC GCCTGCCGAC
AAGGGCTGGT CGTTGCTGGA GCGCTCGGCG CAGGCGTTGC CGACCTTCGC CGAGCGCCCG
GCCTTCATCG CCTGGGGGCT ACGCGATATC TGTTTCGACA AACACTTCCT GGCCGGCTTT
CGTAAAGCAC TGCCACATGC CGAAGTGACT GCATTCGACG ATGCCAATCA CTACGTACTG
GAAGACAAGC ACGAGGTGCT GGTGCCGGCG ATTCGCGCGT TTTTGGAGCG TCATCCGCTA
TAG
|
|---|
| Protein sequence | MNYPGYPFTP KRFEVRPGVA MSYLDEGPRD GEVVVMLHGN PSWSYLWRHL VRGLCDRYRC
IVPDHIGMGL SDKPDDAPDA QPRYDYTLQS RVDDLDTLLR HLGITGPVTL AVHDWGGMIG
FGWALSHHAQ VKRLVITNTA AFPLPAEKPM PWQIAMGRHW RLGEWFIRTF NAFSSGASWF
GVSRRMPAAV RRAYVAPYNT WRNRISTIRF MQDIPLSPAD KGWSLLERSA QALPTFAERP
AFIAWGLRDI CFDKHFLAGF RKALPHAEVT AFDDANHYVL EDKHEVLVPA IRAFLERHPL
|
|---|
| |