| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03934 |
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| Symbol | |
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| ID | 6304074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 572795 |
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| End bp | 575596 |
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| Gene Length | 2802 bp |
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| Protein Length | 933 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642637858 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001911743 |
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| Protein GI | 188574814 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.540261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGAT TAGTCCTGAT CGACGGGTCC AGTTACCTGT ATCGCGCGTT CCACGCGCTT
CCGCCGCTGA CCAATGCGCA GGGCGAACCC ACCGGCGCCT TGTTCGGCGT GGTCAACATG
CTGCGCGCCA CCTTGAAGGA ACGTCCGGCC TACATCGCCT TCGTGGTGGA TGCACCCGGC
AAGACCTTCC GTGACGCCTT GTATGCCGAC TACAAGGCCA ACCGGCCGTC GATGCCCGAC
GACCTGCGCG CGCAGGTACA GCCGATGTGC GACATCGTGC ATGCGCTGGG CATCGACATC
CTGCGCATCG ACGGCGTGGA AGCCGACGAT GTGATCGGCA CGCTGGCGCT GCAGGCCGCT
GCCGATGGGT TGAGCGTGAC CATCTCCACC GGCGACAAGG ACTTTGCCCA GCTGGTGCGC
CCGGGTATCG AACTGGTCAA CACCATGAGC GGCAGCCGCA TGGATTCGGA CGCGGCGGTG
ATCGCCAAGT TCGGCGTGCG GCCCGACCAG ATCGTCGACC TGCTGGCGCT GATGGGCGAC
ACCGTCGACA ACGTGCCCGG CGTGGAAAAA TGCGGTCCCA AGACTGCCGC CAAATGGCTT
GCCGAATACG ATTCGCTGGA CGGCGTGATC GCCAATGCCG ACAAGATCAA GGGTAAGATC
GGCGACAACC TGCGCGCTGC GTTGCCACGC CTGCCGCTCA ACCGTGAGCT GGTCACGATC
AAGATCGATG TGACCCTGGC CAGCGGCCCG CGCGCGCTGG ATCTGCGCGA ACCCAACACC
GAAACGCTAG CGGTACTGTA CGCGCGCTAC GGGTTTACCC AGGCGCTGCG CGAGCTGGGC
GGTGCGCTGG CGCAGTCCGG TCTGTTGTCC GAGCCGGTGG CGCTGGGCGC TGCCGCTGCT
ACCGCGCGCA CCGAGCCGGG CCGTGCGCGC GGCACCGGCT TCGTGTCCGG GCCGGTCAAT
GCAGCGGTGG ACCTGGATCC AGCGCTGTCG GCGCCTGGCG CGTACGAGAC CATCCTGACC
CAGGAGCAGT TGGACAGCTG GATCGCGCAG CTGCGCGCCG CCGGCCAGTT CGCTTTCGAT
ACCGAAACCG ACAGCCTGGA CCCGCTGCAG GCCGACCTGA TCGGCCTGAG CGTGGCCGCC
GAGCCAGGTA AGGCGGCGTA TCTGCCGTTC GGCCACAACT TTCCCGGCGC CCCGGTTCAG
CTCGACCGCA CCCATGCGCT GGCGCAACTG GCGCCGCTGC TCACCGACCC GGCCGTGCGC
AAAGTCGGCC AACACGGCAA GTACGACCTG CACGTGATGC GCCGGCATGG CGTGGAGCTT
GCCGGCTACG CCGACGACAC ACTGCTGGAG AGCTTCGTGC TCAATTCCGG CAGCGCCCGT
CACGACATGG ACAGCCTGGC CAAGCGCTAT CTCGGCTACG ACACCGTCAA GTACGAAGAC
GTTTGCGGCA AGGGCGCCAA GCAGATCCCG TTCGCCCAGA TCAGCCTGGA CGATGCCACC
CGCTACGCCG CCGAAGACGC CGACATCACC CTGCGCCTGC ATCACGTGCT CGGCCCCAAG
CTGGCAGCCG AGCCCGGCCT GGAGCGCGTC TACCGCGACA TCGAAATGCC ACTGGTGGAC
GTGCTGGCGC GCATCGAAGC CAACGGCGTG TGCGTGGACG CCGCCGAACT ACGCCGTCAG
AGCGCGGACC TGTCCAAGCG CATGCTCGCC GCCCAGCAAA AAGCCACCGA GCTGGCAGGG
CGCACCTTCA ACCTGGATTC GCCCAAGCAG CTGCAGGCGC TGTTGTTCGA CGAGCTCAAG
CTCCCCGCCG TGGTCAAGAC GCCCAAGGGC CAGCCCTCGA CCAACGAAGA CGCGCTGGAA
GCCATCGCCG ACCAGCACGA GCTGCCGCGG GTGATCCTGG AATACCGCGG CCTGAGCAAG
CTGCGCAGTA CCTACACCGA CAAGCTGCCG GAGATGATCC ACCCGCAGTC CGGACGCGTG
CACACCAGCT ACCACCAGGC CGGCGCCGCC ACCGGTCGGC TGTCTTCATC GGACCCGAAC
CTGCAGAACA TCCCGATCCG CACCGAAGAC GGCCGCCGCA TCCGCCGCGC TTTCGTCGCC
CCGCCCGGGC GCAAGCTGAT CGCCTGCGAC TACTCGCAGA TCGAGCTGCG CATCATGGCC
CACCTGTCCG GCGACCCCGG CCTGGTCGGC GCGTTCGCGT CCGGCACCGA CGTGCACCGC
GCCACTGCCG CCGAAGTATT CGGCCGCACC ATCGACACCG TCAGCGGTGA CGAGCGCCGC
GCTGCCAAGG CGATCAACTT CGGCCTGATG TACGGCATGA GCGCGTTCGG TCTGGCCCGC
CAGCTCGGCA TCGGCCGTGG CGAAGCGCAG GACTACATCG CGCTGTACTT CAGCCGCTAT
CCGGGCGTGC GCGACTTCAT GGAAACCACC CGCCAGCAGG CGCGCGACAA GGGCTACGTG
GAAACCGTGT TCGGCCGCCG CCTGTATCTG GATTTCATCA ATGCCGGCAG CCAGGGCCAG
CGTGCAGGCG CCGAGCGCGC CGCCATCAAC GCGCCGATGC AGGGCACCGC CGCCGACATC
ATCAAGCGCG CCATGGTCAA GGTGGACGGC TGGATCGCCG ACCACGCGCA ACGCGCCAAA
ATGATCCTGC AGGTGCACGA CGAACTGGTG TTCGAAGCCG ATGTCGATTT CGTCGACACA
CTGCTCAGCG AAGTCACCAC GCGCATGGCC TCCGCAGCTG AATTGCGCGT GCCGTTGGTG
GTGGATTCGG GCGTGGGCGA TGACTGGGAT CAGGCGCACT GA
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| Protein sequence | MSRLVLIDGS SYLYRAFHAL PPLTNAQGEP TGALFGVVNM LRATLKERPA YIAFVVDAPG
KTFRDALYAD YKANRPSMPD DLRAQVQPMC DIVHALGIDI LRIDGVEADD VIGTLALQAA
ADGLSVTIST GDKDFAQLVR PGIELVNTMS GSRMDSDAAV IAKFGVRPDQ IVDLLALMGD
TVDNVPGVEK CGPKTAAKWL AEYDSLDGVI ANADKIKGKI GDNLRAALPR LPLNRELVTI
KIDVTLASGP RALDLREPNT ETLAVLYARY GFTQALRELG GALAQSGLLS EPVALGAAAA
TARTEPGRAR GTGFVSGPVN AAVDLDPALS APGAYETILT QEQLDSWIAQ LRAAGQFAFD
TETDSLDPLQ ADLIGLSVAA EPGKAAYLPF GHNFPGAPVQ LDRTHALAQL APLLTDPAVR
KVGQHGKYDL HVMRRHGVEL AGYADDTLLE SFVLNSGSAR HDMDSLAKRY LGYDTVKYED
VCGKGAKQIP FAQISLDDAT RYAAEDADIT LRLHHVLGPK LAAEPGLERV YRDIEMPLVD
VLARIEANGV CVDAAELRRQ SADLSKRMLA AQQKATELAG RTFNLDSPKQ LQALLFDELK
LPAVVKTPKG QPSTNEDALE AIADQHELPR VILEYRGLSK LRSTYTDKLP EMIHPQSGRV
HTSYHQAGAA TGRLSSSDPN LQNIPIRTED GRRIRRAFVA PPGRKLIACD YSQIELRIMA
HLSGDPGLVG AFASGTDVHR ATAAEVFGRT IDTVSGDERR AAKAINFGLM YGMSAFGLAR
QLGIGRGEAQ DYIALYFSRY PGVRDFMETT RQQARDKGYV ETVFGRRLYL DFINAGSQGQ
RAGAERAAIN APMQGTAADI IKRAMVKVDG WIADHAQRAK MILQVHDELV FEADVDFVDT
LLSEVTTRMA SAAELRVPLV VDSGVGDDWD QAH
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