| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03854 |
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| Symbol | |
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| ID | 6303878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 380100 |
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| End bp | 381359 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642637667 |
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| Product | starvation sensing protein |
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| Protein accession | YP_001911552 |
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| Protein GI | 188574623 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAGA CTTCCGACTC CCCTGCACCG CTGCAAGGTT CTGCCCGCGA TCGCGAGATC
GTCGAGGCAC GCGTCATCGT CACCTGCCCC GGCCGCAATT TCGTCACCTT GAAGATCCGC
ACGCGCTCGG GCATCACCGG CGTGGGCGAT GCCACGCTCA ATGGGCGCGA ATTGGCGGTG
GCCGCGTACC TGCAGGAACA CCTGGTGCCG AATCTGATCG GCCGCGACGC CGGGCGCATC
GAAGACATCT GGCAGTTCTT CTACCGCGGC GCGTACTGGC GGCGCGGGCC GGTGACGATG
AGTGCGATTG CCGCGGTGGA TGTGGCGTTG TGGGACATCC TGGGCAAGAT GGCCGGCATG
CCGCTGTATC AGCTGCTTGG CGGGCGCTCA CGCGAAGGTG CGCTGGTGTA TGGGCATGCC
AATGGCCGCG ATATCGCCGA AACCACCGAT GAAGTGGGCC GCTTCCGCGA GATGGGCTTT
ATCGCGATTC GCGCGCAATG CGGCGTACCC GGCATCAAGA AGACCTACGG CATCTCCGTC
GGTGGCAAGC CGTACGAACC GGCCGAAAGC GAGCTGCCCA CCGAAACCGT GTGGTCCACA
CCGCGCTATC TCGGCGTGGT GCCCAAGTTG TTCGAGCAGT TGCGCAGCGA TCACGGCGAT
GAGATCGAGC TGCTACATGA CGCGCATCAC CGGCTCACAC CGATCGAAGC CGCGCGCCTG
GGCCGCGATC TGGAGCCGTA CCGGCTGTTC TGGCTGGAAG ACGCCACGCC GGCAGAAAAC
CAACGTGCGT TCGAAATCAT TCGCCAGCAC ACCGTGACGC CGCTGGCGGT GGGTGAGGTG
TTCAATTCGA TCTGGGACTG CAAGCACCTG ATCGAGCAGC AACTGATCGA TTACATCCGT
ACCACGATTG TCCACGCCGG CGGCATCACC CACGTGCGCC GGCTGGCCGA CTTCGCCGCG
CTGCATCAGG TGCGCACCGG CTTCCACGGC GCCACCGATC TTTCGCCGGT GTGCATGGGC
GCAGCGCTGC ACTTCGATAC CTGGGTGCCC AATTTCGGCA TCCAGGAATA CATGTTCCAT
TCCGACGAAG CCAATGCGGT GTTCCCGCAT GACTACATGT TCCGCGATGG CCGCCTGCAC
TGCGGCGAGA CGCCCGGGCA TGGTGTGGAC ATCGACGAAA CGCTTGCAGC GAAGTATCCG
TACGTGCCCA AACAGTTGCC GATCGCGCGA CTGGAAGACG GCGCGATGTG CGACTGGTGA
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| Protein sequence | MSQTSDSPAP LQGSARDREI VEARVIVTCP GRNFVTLKIR TRSGITGVGD ATLNGRELAV
AAYLQEHLVP NLIGRDAGRI EDIWQFFYRG AYWRRGPVTM SAIAAVDVAL WDILGKMAGM
PLYQLLGGRS REGALVYGHA NGRDIAETTD EVGRFREMGF IAIRAQCGVP GIKKTYGISV
GGKPYEPAES ELPTETVWST PRYLGVVPKL FEQLRSDHGD EIELLHDAHH RLTPIEAARL
GRDLEPYRLF WLEDATPAEN QRAFEIIRQH TVTPLAVGEV FNSIWDCKHL IEQQLIDYIR
TTIVHAGGIT HVRRLADFAA LHQVRTGFHG ATDLSPVCMG AALHFDTWVP NFGIQEYMFH
SDEANAVFPH DYMFRDGRLH CGETPGHGVD IDETLAAKYP YVPKQLPIAR LEDGAMCDW
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