Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03848 |
Symbol | xylA |
ID | 6303884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 386996 |
End bp | 388333 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642637673 |
Product | xylose isomerase |
Protein accession | YP_001911558 |
Protein GI | 188574629 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2115] Xylose isomerase |
TIGRFAM ID | [TIGR02630] xylose isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAACA CCGTCTACAT CGGCGCGAAA GAATATTTCC CCGGCATCGG CAAGATCGGT TTCGAAGGCC GCGAGTCGGA CAACCCGCTC GCGTTCAAGG TCTACGATGC CAACAAGACC ATTGGCGACA AGACCATGGC CGAGCATCTG CGCTTTGCCG TGGCCTACTG GCACAGCTTC TGCGGCAATG GCGCCGATCC GTTCGGCCCG GGTACGCGTG CGTATCCGTG GGATGTGGGC AACAGCGCGC TGGCGCGGGC TGAAGCCAAA TCCGATGCCG CGTTCGAGTT CTTCACCAAG CTCGGCGTGC CGTACTACTG CTTCCACGAC ATCGACCTGT CGCCGGATGC CGATGACATC GGCGAATACG AGAGCAACCT CAAGCACATG GTGGGTGTTG CCAAGCAGCG TCAGGCCGAC ACCGGCATCA AGCTGCTGTG GGGCACGGCC AATCTGTTCT CGCATCCGCG CTACATGAAT GGTGCCTCGA CCAACCCGGA CTTCAACGTC GTCGCGCGTG CGGCGGTGCA GGTCAAGGCC GCGATCGATG CCACGGTGGA GCTGGGCGGC GAAAACTACG TGTTCTGGGG CGGCCGCGAA GGCTATGCCT GCCTGCACAA CACGCAGATG AAGCGCGAGC AGGACAACAT GGCGCGGTTC CTCACCCTGG CGCGCGACTA CGGCCGCAGC ATCGGCTTCA CCGGCAACTT CCTGATCGAG CCAAAACCCA TGGAGCCGAT GAAGCATCAG TACGATTTTG ATAGCGCGAC CGTGATCGGT TTCCTGCGTC AGCACGGTCT GGATCAGGAC TTCAAGCTCA ACATCGAAGC CAACCACGCC ACCTTGTCCG GCCATAGCTT CGAGCATGAC CTGCAGGTCG CCTCCGATGC CGGCCTGCTG GGCAGCATCG ATGCCAACCG CGGCAACCCG CAGAACGGTT GGGATACCGA CCAGTTCCCG ACCGATCTGT ACGACACCGT TGGTGCGATG CTGGTAGTGC TGCGTCAGGG TGGCTTGGCA CCGGGGGGGT TGAACTTCGA TGCCAAGGTG CGTCGCGAAT CGTCCGATCC GCAGGACCTG TTCCTGGCGC ACATCGGCGG CATGGACGCG TTCGCACGCG GGCTGGAAGT GGCCAATGCA CTGCTGACGT CCTCGCCGTT GGAGCAGTGG CGCGCCGAAC GTTATGCCAG CTTCGACAAT GGTACCGGCG CCGACTTTGC CGCAGGCAAG ATCACGCTGG CGGATCTGGC CGCACATGCC GCCGGCAATG CGCCCAAGCA GATCAGCGGC CGCCAGGAAG CGTACGAAAA CTTGATCAAT CAGTATCTGA CGCGTTGA
|
Protein sequence | MSNTVYIGAK EYFPGIGKIG FEGRESDNPL AFKVYDANKT IGDKTMAEHL RFAVAYWHSF CGNGADPFGP GTRAYPWDVG NSALARAEAK SDAAFEFFTK LGVPYYCFHD IDLSPDADDI GEYESNLKHM VGVAKQRQAD TGIKLLWGTA NLFSHPRYMN GASTNPDFNV VARAAVQVKA AIDATVELGG ENYVFWGGRE GYACLHNTQM KREQDNMARF LTLARDYGRS IGFTGNFLIE PKPMEPMKHQ YDFDSATVIG FLRQHGLDQD FKLNIEANHA TLSGHSFEHD LQVASDAGLL GSIDANRGNP QNGWDTDQFP TDLYDTVGAM LVVLRQGGLA PGGLNFDAKV RRESSDPQDL FLAHIGGMDA FARGLEVANA LLTSSPLEQW RAERYASFDN GTGADFAAGK ITLADLAAHA AGNAPKQISG RQEAYENLIN QYLTR
|
| |