Gene PXO_03636 details

Gene Information

• Locus tag: PXO_03636
• Symbol: gidA
• ID: 6303745
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 229172
• End bp: 231076
• Gene Length: 1905 bp
• Protein Length: 634 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 642637535
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_001911420
• Protein GI: 188574491
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGACT CTTTCTATCG CTACGACGTC ATCGTGATCG GCGGCGGCCA TGCCGGCACC 
GAGGCCGCCC TGGCGTCGGC CCGCGCCGGT GCCCGCACCT TGCTGCTGAC CCACACCATC 
GAAACGGTGG GCGCAATGAG CTGCAACCCG GCCATCGGCG GGATCGGCAA GGGCCATCTG 
GTCAAGGAGA TCGACGCGCT TGGCGGGGCG ATGGCACACG CAGCGGACCT GGCCGGCATC 
CAGTGGCGCA CGCTAAACGC CTCCAAGGGG CCGGCCGTGC GTGCCACGCG CTGCCAGGCC 
GACCGCAATC TGTACCGCAC TGCGATCCGC TGCATCGTCC AGGCTCAGCC AAAGCTGACC 
GTGTTCCAGG CGGCAGTGGA CGATCTGATC ATCCACAACG GCACCTGCGA AGCCGACAGC 
GTGCGCGGGG TCATCACCCA GACCGGGCTG CGCTTCGAAG CGCCGTCGGT GGTGCTGACC 
GCCGGTACGT TTTTGGCCGG CAAGATCCAT GTCGGCGACA CCCAGTACGC GGCCGGGCGC 
CTGGGCGACC CGCCGGCCAC CACGCTGGCC GCGCGTCTGC GCGAGCGCCC GTTCGCGATC 
GACCGGCTCA AGACCGGCAC GCCGCCGCGG ATCGATGGGC GTACGCTCGA TTACGGCGTG 
ATGGGCGAGC AGCCAGGCGA CGACCCGCTG CCGGTCATGT CGTTCATGGG CCAGGTCAGC 
GACCATCCGC GCCAGGTCAG CTGCTGGATC ACCCAGACCA CCGAGCAAAC CCACGACATC 
ATTCGCAACG CGCTGCATCG CTCACCGCTG TATTCCGGGC AGATCGAAGG CATCGGCCCA 
CGCTACTGCC CGTCGATCGA GGACAAGGTG GTGCGCTTCG CCGAGAAGAC CAGCCACCAG 
ATCTTCGTCG AGCCCGAAGG CCTGGACGTG GCCGAGATCT ATCCCAACGG CATCTCCACC 
TCGCTGCCGT TCGATGTGCA GCTGGCGCTG GTGCGTTCAA TTCATGGCTT TGCGCAAGCG 
CATATCACCC GCCCCGGCTA CGCCATCGAG TACGACTTCT TCGACCCGCG CGGGCTCAAG 
GCCTCGCTGG AAACCAAAGC GGTGGGCGGG CTGTTTTTTG CCGGGCAGAT CAACGGCACC 
ACCGGTTACG AAGAGGCCGC CGCACAGGGG CTGCTGGCCG GGCTCAACGC CGCGCGCCAC 
GTGCATGGCC TGCCGGCATG GTCGCCGCGC CGCGACGAAG CCTACCTGGG CGTGCTGGTC 
GACGATCTGA TCACCCATGG CACCACCGAG CCGTATCGCA TGTTCACCAG CCGCGCCGAA 
TACCGACTGC AGCTGCGCGA GGACAATGCC GATGCGCGGT TGACCGGCGC CGGCCGTGAG 
ATGGGTCTGG TCGACGACGC GCGCTGGGCG CGCTTCTCGG CCAAGCAAGA AGCCGTGCAG 
CGGGAAACCG CGCGGTTGTC GGCGCTGTGG GCCACGCCGG GCAATGCCCT GGGCCGCGAG 
GTCGCCGACG CGCTGGGCGT GACGGTCAGC CGCGAAACCA ACGTGCTGGA TCTGATCAAG 
CGCCCCGAAC TCAACTACGC CACCTTGATG CGGGTGCCGA CGCTGGGGCC GGGCGTGGAC 
GATGCGCAGG TGGCCGAACA GGTCGAGATC AGCGTCAAGT ACACTGGCTA CCTGGATCGC 
CAGCGCGACG ACATCGCGCG TCAGCAACGC CACGAAACCA CGCCGATCCC CGAAGGATTC 
GATTACGCTG GCGTGCGTGG TCTGTCGATT GAAGTGCAAC AGAAACTCGA GCACGTGCGC 
CCGCAACACA TCGGCCAGGC ACAACGCATT CCCGGCATGA CCCCGGCAGC GATCTCACTG 
CTGCTGGTGC ATCTGGAGCG CGCGCGACGT CATCGGGTGG CGTGA 

 

Protein sequence

MSDSFYRYDV IVIGGGHAGT EAALASARAG ARTLLLTHTI ETVGAMSCNP AIGGIGKGHL 
VKEIDALGGA MAHAADLAGI QWRTLNASKG PAVRATRCQA DRNLYRTAIR CIVQAQPKLT 
VFQAAVDDLI IHNGTCEADS VRGVITQTGL RFEAPSVVLT AGTFLAGKIH VGDTQYAAGR 
LGDPPATTLA ARLRERPFAI DRLKTGTPPR IDGRTLDYGV MGEQPGDDPL PVMSFMGQVS 
DHPRQVSCWI TQTTEQTHDI IRNALHRSPL YSGQIEGIGP RYCPSIEDKV VRFAEKTSHQ 
IFVEPEGLDV AEIYPNGIST SLPFDVQLAL VRSIHGFAQA HITRPGYAIE YDFFDPRGLK 
ASLETKAVGG LFFAGQINGT TGYEEAAAQG LLAGLNAARH VHGLPAWSPR RDEAYLGVLV 
DDLITHGTTE PYRMFTSRAE YRLQLREDNA DARLTGAGRE MGLVDDARWA RFSAKQEAVQ 
RETARLSALW ATPGNALGRE VADALGVTVS RETNVLDLIK RPELNYATLM RVPTLGPGVD 
DAQVAEQVEI SVKYTGYLDR QRDDIARQQR HETTPIPEGF DYAGVRGLSI EVQQKLEHVR 
PQHIGQAQRI PGMTPAAISL LLVHLERARR HRVA