| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03624 |
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| Symbol | mdoD |
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| ID | 6303757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 240207 |
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| End bp | 241811 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642637547 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_001911432 |
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| Protein GI | 188574503 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATGC AACGACGCCA CTTGCTGAAA AATGCTGCCG CCGCATTGGC CGCGCTCGGT
CTGCCGGCGC TGCCGCAGTG GGCGCTGGCA GCCAAGGCGG TTGGGTTGCG GCGGCTCGGG
CAGCCGCAGC CGTTCGACTA TGCTTGGTTG AAGGGTCGGG CGCGCGAGCT GGCAAAGGCG
CCGTACAAGA GCCATAAGCA GGTTTTGCCG GGGCCACTGG AGGCGCTGAA CTGGGATCAG
TACCAGTCCA TCCGCTACCG CCAGGACCAC GCGCTGTGGG CCGATGGCAA TGGCAAATTC
CAGGCGAAGT TCTTCCATCT TGGGCTGTAT TTCCATACCC CGGTGCACAT CTACGACATC
GTCGATGGCA AGGCGCAGCA GCTGGCATAC GACCCGGCCG CATTCGATTA CGGCAAAAGC
GGGCTGGGTG GCAAGCAATT GCCGAAGGAT CTGGGCTTTG CCGGTTTCCG GCTCAATACG
CGCAAGGATA CCGAGCGCGA CTTTTCGGCG TTCCTGGGCG CGAGCTATTT CCGTGCTGTC
GGCAAGGAAG GCCAGTACGG ACAATCCGCG CGCGGGCTGG CGATCGATAC CGGGACCGGC
GGGCCGGAAG AGTTTCCGGA TTTCATCGCC TATTACCTGG AGCAGCCGGC CGCCGACTCG
AACACGGTGG TGGTGTACGG GTTGCTGGAT TCGCCCAGCA TTGCCGGCGC CTACCGGTTC
GCCATCACCA ATGGCGATGT GCTGCTGATG GACATCGACA GCGCGTTGTA CCCGCGCAAG
ACGATCGAGC GGCTGGGCAT CGGGCCGTGC ACCAGCATGT ATCAGGTCGG CGAAAACGAT
AACCGGATGG ACTGGGACTG GCGCCCGGAA ATTCACGACA CCGATGGCTT GGCGATGTGG
ACCGGTGGCG GCGAGTGGAT CTGGCGCCCG TTGTGCAACC CGCCGCACGT GCGCTTCAAC
ATGTTTGTCG ACGAAAACCC GCGTGGCTTC GGGCTGCTGC AGCGCGACCG CAACTTCGAC
CATTACCAGG ACGATGGCGT GTTTTACGAG AAGCGCCCCT GCCTGTGGGT GGAACCCAAG
AGTGGTTGGG GCAAGGGCTC GGTGCAGTTG GTCGAGATTC CGACTGTGGA CGAAACCTTC
GACAACATCG TGGCGTTCTG GAACCCGCAA GCAAAGCCGC AGCCTGGGCA GGAACTGCTG
ATGGGCTACC GGCTGTATTG GGGCGCGCAG CCGCCGGCCA GCGCGCCGCT GGCGCATTGC
GTGGCCACCC GAACCGGCCT TGGCGGCATC GTGGGGCAAA AGCGCAGCCA CTTTTCCTGG
CGCTTTGCAG TGGATTTTGC CGGCGGCGAA CTGGCGGCGC TGGCAAAAGA CCCCAAGGCC
AAGGTGGAGG CGGTGCTGCA GGTGTCGCGC GGCACCACCG AAATCGTGTC GGCGCGCCCG
CTGCATGAGC TCAAGGGCTA TCGGGCAATG TTCGACCTGG TACCGCCGGA CGAGGGCACC
CAGCAGATCG ATATCCGCCT GTATCTGCGC GCCAACGGCA AGCCGCTGAC CGAAACCTGG
CTGTACCAGT GGACCCCGCT GGCGGCGAGC GAGCGCAAGA ATTGA
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| Protein sequence | MRMQRRHLLK NAAAALAALG LPALPQWALA AKAVGLRRLG QPQPFDYAWL KGRARELAKA
PYKSHKQVLP GPLEALNWDQ YQSIRYRQDH ALWADGNGKF QAKFFHLGLY FHTPVHIYDI
VDGKAQQLAY DPAAFDYGKS GLGGKQLPKD LGFAGFRLNT RKDTERDFSA FLGASYFRAV
GKEGQYGQSA RGLAIDTGTG GPEEFPDFIA YYLEQPAADS NTVVVYGLLD SPSIAGAYRF
AITNGDVLLM DIDSALYPRK TIERLGIGPC TSMYQVGEND NRMDWDWRPE IHDTDGLAMW
TGGGEWIWRP LCNPPHVRFN MFVDENPRGF GLLQRDRNFD HYQDDGVFYE KRPCLWVEPK
SGWGKGSVQL VEIPTVDETF DNIVAFWNPQ AKPQPGQELL MGYRLYWGAQ PPASAPLAHC
VATRTGLGGI VGQKRSHFSW RFAVDFAGGE LAALAKDPKA KVEAVLQVSR GTTEIVSARP
LHELKGYRAM FDLVPPDEGT QQIDIRLYLR ANGKPLTETW LYQWTPLAAS ERKN
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