Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03563 |
Symbol | sodC |
ID | 6303819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 312355 |
End bp | 312957 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642637608 |
Product | superoxide dismutase |
Protein accession | YP_001911493 |
Protein GI | 188574564 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2032] Cu/Zn superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTATC GGTCGCCGAC GATCGTTGCC CTCACCGCGC TGGCGCTGGC CGCCTGCAGC AGCACGCCAG CGCCGCCGAA GGCGCCTCCA CCGCCGGCCG CACGCGTGGT GCCCTCTCGC CCGGTGCAAC AGGCCGAAGC GGTGCTGGCC TCGGCCTCGG GCAGCTTGGT CAGCGGCCGG GTGGTGCTGG TGCCTGCATT GCAGGGCATC CGTCTCACCG GCACCATCGG CGGGCTGCGT CCGGGCGGCG TGTCGGGATT TCATGTGCAC GAACGCGGCG ATTGCAGCGC GGCCGATGCG AGCAGTGCCG GCGCGCATTT CAATCCGAGC GGTACGCCGC ACGGGCGTGC CGGGAGCGGT CCGCACAATC TGGGCGACAT GGACAATCTG CGTGCCGACG CCGAAGGGGT AGTGCATCTG GACATGATTC TGTCGGGCAT CAGCCTGGGC GACGGCGCGC CGAGCGACGT GGTCGGCAGG TCGCTGATCG TGCATGCCGA CGCCGACGAC TATCGCAGCC AGCCCAGCGG CAATGCCGGC GTGCGTCTGG CCTGCGGCGT CATTCGTGTC GCCAAACGGG GCACGCCCCC TTCGCAGCCC TGA
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Protein sequence | MRYRSPTIVA LTALALAACS STPAPPKAPP PPAARVVPSR PVQQAEAVLA SASGSLVSGR VVLVPALQGI RLTGTIGGLR PGGVSGFHVH ERGDCSAADA SSAGAHFNPS GTPHGRAGSG PHNLGDMDNL RADAEGVVHL DMILSGISLG DGAPSDVVGR SLIVHADADD YRSQPSGNAG VRLACGVIRV AKRGTPPSQP
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