| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03375 |
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| Symbol | glgB |
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| ID | 6303631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 100879 |
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| End bp | 103065 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642637425 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_001911310 |
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| Protein GI | 188574381 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCACGG AAGGGATCTC GGAGATGTCG CAGACCCTGC AAGCGCTGGC CGATGGATTG
CCGGTCGACG CCTTTGCGGT CCTTGGGCCG CACCCGCTCG CCGATGGGCG CCGCCAAGTG
CGTGTGCTGG CGCCGGGGGC CGAGGCGATG GGGTTGATCG ACTCGCGCGG CAAGTTGCTG
GCACGCATGC AGGCTAGCGC GATTGACGGC GTCTTTGAAG GCATCCTGTC GATCGAAGGG
CCGTACCGGC TGCGCATCGT GTGGCCGGAC ATGGTGCAGA AGATCGAAGA CCCGTACGCG
TTCGCGGTCA CACTGGACGA ATCGCTGTTG CTGCAGATCG CCGCTGGCGA TGGTCAGGCG
CTGCGCCGCG CGCTGGGCGC GCAGCATGTG CAATGTGGCG AAGTGCCCGG CGTGCGCTTT
GCAGTGTGGG CACCGCATGC GCAACGCGTG GCCGTGGTTG GTGACTTCAA TGGCTGGGAC
GTGCGGCGGC ACCCGATGCG CCAGCGTATC GGCGGCTTCT GGGAACTGTT TCTGCCGCGC
GTGGAAGCTG GCCCGCGCTA CAAGTACGCC GTCACTGCAG CCGATGGCCG CGTGCTGCTC
AAGGCCGACC CGGTGGCGCG GCAAACCGAA TTACCGCCGG CCACCGCCTC GGTGGTGCCC
GGCACGGCCA CCTTTGCGTG GACCGACGCG GCCTGGATGG CCAAGCGCGA TCCCAGCGCC
GTGCCGGCGC CGCTGTCGAT CTACGAAGTG CATGCCGCGT CCTGGCGCCG CGACGGACAT
AACCAGCCGC TGGACTGGCC AACCCTGGCC GAGCAACTGA TTCCCTACGT GCAGCAGCTC
CGCTTCACCC ATATCGAATT GCTGCCGATC ACCGAGCACC CGTTCGGCGG TTCCTGGGGC
TACCAGCCGC TGGGCCTGTA TGCGCCCACC GCCCGCCACG GCAGCCCGGA CGGGTTTGCG
CAGTTCGTCG ACGCCTGCCA CCGCGCTGGC ATCGGCGTGA TCCTGGACTG GGTCAGCGCG
CACTTCCCCG ATGACGCGCA TGGGCTGGCG CAGTTCGACG GCGCCGCGCT GTATGAGCAC
GCCGACCCTC GGGAAGGCAT GCATCGCGAC TGGAACACCC TGATCTACAA CTACGGCCGG
CCGGAAGTGA CCGCCTACCT GCTGGGGAGC GCGCTGGAGT GGATCGACCA TTACCATCTC
GACGGCCTGC GCGTGGATGC GGTGGCCTCG ATGCTGTACC GCGACTACGG CCGCGCCGAA
GGCGAGTGGG TGCCCAACGC GCATGGCGGC CGCGAGAATC TAGAGGCAGT GGCGTTCCTG
CGTCAGCTCA ACCGCGAGAT CGCCGCACAC TTCCCCGGCG TGCTCACCAT CGCCGAAGAA
TCCACCGCCT GGCCGGGCGT GACCGCGGCG ATCAGCGATG GCGGCCTGGG CTTCACGCAC
AAATGGAACA TGGGCTGGAT GCACGACACG CTGAGCTATA TGCAGCGCGA TCCAGCCGAA
CGTGCGCATC ACCATAGCCA GCTCACCTTC GGGCTGGTGT ACGCATTCGA CGAGCGGTTC
GTCTTACCCA TCTCGCACGA TGAAGTGGTG CACGGCACCG GTGGCTTGCT CGGGCAGATG
CCGGGCGACG ACTGGCGCCG CTTCGCCAAC CTGCGCGCGT ATCTGGCGCT GATGTGGGCG
CACCCGGGCG ACAAACTGCT GTTCATGGGC GCCGAATTCG GTCAATGGGC CGATTGGAAT
CATGACCAGT CGCTGGATTG GCATCTGCTT GAAGGCGCGC GCCACCGCGG CGTGCAGCTG
CTGGTGGGCG ACCTCAACGC CACGTTGCGT CGCACTCCCG CGTTGTATCG CGGTACCCAT
CGCGCCGAAG GTTTCGACTG GAGCGTGGCC GACGACGCGC GCAACAGCGT CTTGGCCTTC
ATCCGCCACG ATCCTGACGG CGGCGGCGTG CCGCTGCTGG CAGTGAGCAA CCTCACCGCG
CAACCGCTGC ACGACTATGG CGTGGGCGTG CCGCGCGCCG GCGCCTGGCG CGAAATCCTC
AACACCGACA GTGCCCATTA CGGTGGCAGC AACCTCGGCA ACAGCGGTCG TCTTGCGACT
GAGCCGATGG GCATGCATGG GCATGCGCAA CGCCTGCGCC TGACCCTGCC GCCGCTGGCC
ACGATCTATC TGCAAGCGGA GAAATAG
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| Protein sequence | MTTEGISEMS QTLQALADGL PVDAFAVLGP HPLADGRRQV RVLAPGAEAM GLIDSRGKLL
ARMQASAIDG VFEGILSIEG PYRLRIVWPD MVQKIEDPYA FAVTLDESLL LQIAAGDGQA
LRRALGAQHV QCGEVPGVRF AVWAPHAQRV AVVGDFNGWD VRRHPMRQRI GGFWELFLPR
VEAGPRYKYA VTAADGRVLL KADPVARQTE LPPATASVVP GTATFAWTDA AWMAKRDPSA
VPAPLSIYEV HAASWRRDGH NQPLDWPTLA EQLIPYVQQL RFTHIELLPI TEHPFGGSWG
YQPLGLYAPT ARHGSPDGFA QFVDACHRAG IGVILDWVSA HFPDDAHGLA QFDGAALYEH
ADPREGMHRD WNTLIYNYGR PEVTAYLLGS ALEWIDHYHL DGLRVDAVAS MLYRDYGRAE
GEWVPNAHGG RENLEAVAFL RQLNREIAAH FPGVLTIAEE STAWPGVTAA ISDGGLGFTH
KWNMGWMHDT LSYMQRDPAE RAHHHSQLTF GLVYAFDERF VLPISHDEVV HGTGGLLGQM
PGDDWRRFAN LRAYLALMWA HPGDKLLFMG AEFGQWADWN HDQSLDWHLL EGARHRGVQL
LVGDLNATLR RTPALYRGTH RAEGFDWSVA DDARNSVLAF IRHDPDGGGV PLLAVSNLTA
QPLHDYGVGV PRAGAWREIL NTDSAHYGGS NLGNSGRLAT EPMGMHGHAQ RLRLTLPPLA
TIYLQAEK
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