| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03308 |
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| Symbol | |
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| ID | 6308496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 5092938 |
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| End bp | 5094242 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642642212 |
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| Product | tetracycline-efflux transporter |
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| Protein accession | YP_001916037 |
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| Protein GI | 188579108 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0389216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCTCC CACCCGATTC CGCTCCCGCC CCGGGCCGGC GCCGCGCCGC ACTGATCTTC
ATCTTCATCA CCGTCCTGAT CGACGTGCTG TCGTTCGGCG TGATCATTCC GGTGCTGCCG
GGCCTGGTGC GGCACTTTAC CGGTGGCGAT TACGTGCAGG CCGCGGCCTG GATCGGCTGG
TTCGGCTTTC TGTTCGCCGC CATCCAGTTC GTCTGCTCGC CGTTGCAGGG CGCGCTCTCC
GACCGCTTCG GTCGCCGCCC GGTGATCCTG CTCTCGTGCC TGGGTCTGGG TCTGGACTTC
ATCCTGATGG CCGTCGCCCA CAGCCTGCCC ATGCTGCTGC TGGCACGGGT GATCTCCGGC
GTGTGCTCGG CCAGCTTCTC CACCGCCAAC GCCTACATCG CCGACGTCAC CGCCTCCGAC
CAACGCGCCG GCGCGTTCGG CATGCTCGGT CCCGTATTCG GCATTGGCCT CGTCGCTGGC
CCGTTGATCG GTGGTTGGCT GGGCAGCATG GGGTTACGCT GGCCGTTCTG GTTTGCCGCC
GGCTTGGCCT TGTTGAATGT GCTGTACGGC TGGTTCGTGC TGCCCGAATC GCTGCCCGTC
GAACGCCGCA CCGCACGGCT GGATTGGTCG CATGCCAATC CACTTGGCGC GCTCAAGCTG
CTGCGCCGCT ATCCGCAGGT GTTCGGCCTG GCCTCGGTGG TGTTCCTGGC CAACCTGGCG
CACTACGTGT ATCCCAGCAT CTTCGTGCTG TTCGCCGGCT ACCAATATCA CTGGGGCCCG
CGCGAAGTGA GTTGGGTACT GGCCGGCGTC GGCGTGTGCA GCATCATCGT CAACGTGTTG
CTGGTCGGCC GCCTGGTGCG CTGGCTCGGC GAACCCCGCG CCTTGCTGCT GGGGCTGGGC
TGCGGGGTGA TCGGCTTTGT CATCTATGGG CTGGCCGATA GCGGCGCCGC GTTCCTGATC
GGGGTGCCGA TCAGCGCGTT GTGGGCGCTC GCCGCCCCTT CCGCGCAAGC CCTGATCACC
CGCGAGGTCG GCGCCGATGC GCAAGGTCGC GTGCAGGGCG CGCACCGGTC TGGTCAGCCT
GGCCGGCATC GCCGGCCCGC TGTTGTTCGC CAATGTGTTC GCCTTGTTTA TCGGCAGCGG
TGCGCCACTG CATCTGCCCG GCGCACCATG GTTGCTGGCC GGTGTGCTGC TCGCCGCAGG
CTGGGGCATG GCCTGGAAAC GGGCAGGGCG GGGCACCGGC ACCGCGGCTG CAACGCAGGG
ATAAAGACAA CCTATTCAGC TTGCGCTCGC GTCCGCTTTT TCTGA
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| Protein sequence | MTLPPDSAPA PGRRRAALIF IFITVLIDVL SFGVIIPVLP GLVRHFTGGD YVQAAAWIGW
FGFLFAAIQF VCSPLQGALS DRFGRRPVIL LSCLGLGLDF ILMAVAHSLP MLLLARVISG
VCSASFSTAN AYIADVTASD QRAGAFGMLG PVFGIGLVAG PLIGGWLGSM GLRWPFWFAA
GLALLNVLYG WFVLPESLPV ERRTARLDWS HANPLGALKL LRRYPQVFGL ASVVFLANLA
HYVYPSIFVL FAGYQYHWGP REVSWVLAGV GVCSIIVNVL LVGRLVRWLG EPRALLLGLG
CGVIGFVIYG LADSGAAFLI GVPISALWAL AAPSAQALIT REVGADAQGR VQGAHRSGQP
GRHRRPAVVR QCVRLVYRQR CATASARRTM VAGRCAARRR LGHGLETGRA GHRHRGCNAG
IKTTYSACAR VRFF
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