| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03183 |
|---|
| Symbol | |
|---|
| ID | 6307998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 4611636 |
|---|
| End bp | 4612748 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642641725 |
|---|
| Product | ABC transporter permease |
|---|
| Protein accession | YP_001915562 |
|---|
| Protein GI | 188578633 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAC CGCAACCTCC ACGCATCGAA CAAGACTCGC AGGATCAGGC GCAGCTCCGC
CTCGCTGGCA GTTGGGTCCT GGCGACCGCC CTGCCCCAGG CAGAATTGCT ACAGACCGTG
CCCGACGGGG TGCGCCGCAT CGACGCGCGC GGCATCCAGC AGCTGGATTC GGCAGGCGTG
CTGCAGTTGC TGCGCTTTGC CAGCCGGATT GGACTGAAGG AAGACGCGAT CGATTTCCGC
GATGAGCATC AGGCGCTGGT GTGCACCATC GAGGAGCTCA ACGACGAGCG CCCCAAGCCC
AAACGCGATT ACGGCTTCGT CGCTGCGCTC GACCGCCTGG GTCGGGCCAC CCACCGCATC
GGCCAGGACA TCCTGGAGTT GAACAGTTTT CTGGGCGAAA ACCTGGTCAA GATCATGCGG
CTGATCCACG AGCCGCGCCG TTTCCGGCTC ACCTCCACCG TGCACCACAT GGAGCAGGTG
GGCCTGGATG CGGTGCCGCT GGTGGTGCTG CTGTCGTACC TGGTGGGCGC GGTGATCGCG
TTCCTGGGCT CGACCATCCT GCGCGACTTC GGCGCGGAAA TTTACGTGGT GGAGCTGGTC
AGCATCGCCT TCCTGCGCGA ATTCGCCGTG CTGCTCACCG CCATCGTGCT GGCCGGGCGC
ACCGCCAGCG CGTTTACCGC GCAGATCGGT GCGATGAAGT CGCGCGAAGA GGTCGATGCC
ATCCGCACCC TGGGCCTGGA CCCGATCGAC CTGCTGGTGA TTCCGCGCCT GCTCGCGCTG
ATCTTCACCC TGCCGCTGCT GACCTTCATC GCGATGATCG CCGGCCTGGC CGGTGGCGTC
ACCGTGGGTG CGTTCGACCT GGATATCCCG CCGCAGATGT ACCTGGCGCG CATGCACGAG
ACCATCCAGC TGCGGCATTT CCTGGTCGGG CTCTCGAAAG CACCGTTGTT TGCGCTGGTG
ATCGGCCTGA TCGGCTGCCT GGAAGGCTTG AAGGTCAGCG GCACCGCGCA ATCGGTGGGC
GAACGCACCA CCTCCTCGGT GGTGCAGACG ATTTCCTTGG TCATCATCCT CGACGCGATT
GCGGCGTTGT GGTTCATGAA GATGGGGTGG TGA
|
|---|
| Protein sequence | MIKPQPPRIE QDSQDQAQLR LAGSWVLATA LPQAELLQTV PDGVRRIDAR GIQQLDSAGV
LQLLRFASRI GLKEDAIDFR DEHQALVCTI EELNDERPKP KRDYGFVAAL DRLGRATHRI
GQDILELNSF LGENLVKIMR LIHEPRRFRL TSTVHHMEQV GLDAVPLVVL LSYLVGAVIA
FLGSTILRDF GAEIYVVELV SIAFLREFAV LLTAIVLAGR TASAFTAQIG AMKSREEVDA
IRTLGLDPID LLVIPRLLAL IFTLPLLTFI AMIAGLAGGV TVGAFDLDIP PQMYLARMHE
TIQLRHFLVG LSKAPLFALV IGLIGCLEGL KVSGTAQSVG ERTTSSVVQT ISLVIILDAI
AALWFMKMGW
|
|---|
| |