| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03113 |
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| Symbol | atpD |
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| ID | 6308077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 4682028 |
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| End bp | 4683434 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642641803 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_001915640 |
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| Protein GI | 188578711 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGG GCAAGATCGT TCAGATCATC GGCGCGGTCG TCGACGTCGA ATTCCCGCGC
AATGAAGTGC CGAAGGTGTA TCACGCGCTG AAGGTCGAAG GCACCGAAAT CACCCTGGAA
GTGCAGCAGC AGCTCGGCGA CGGCGTCGTG CGCACGATTG CGCTCGGCTC CACCGACGGC
TTGAAGCGCA ACCTGCTGGC CACCAACACC GAGCGCGCCA TCTCGGTGCC GGTCGGTGCC
GGTACGCTGG GCCGCATCAT GGACGTGCTG GGTCGTCCGA TCGACGAAGC CGGCGACGTG
CAGGCGTCGG ACCATTGGGA AATCCATCGC GGCGCACCGT CGTACGAAGA CCAGTCCTCC
AGCACCGAAT TGCTGGAAAC CGGCATCAAG GTCATCGACC TGATGTGCCC GTTCGCCAAG
GGCGGCAAGG TCGGCCTGTT CGGCGGCGCC GGCGTCGGCA AGACCGTCAA CATGATGGAA
CTGATCAACA ACATCGCCAA GGCGCACAGC GGCTTGTCCG TGTTCGCCGG CGTGGGCGAG
CGTACCCGCG AGGGCAACGA CTTCTACCAC GAGATGAAGG ACTCCAACGT TCTGGACAAG
GTCGCGATGG TGTACGGCCA GATGAACGAG CCGCCGGGCA ACCGTCTGCG CGTTGCGCTG
ACCGGCCTGA CCATGGCCGA GTACTTCCGC GACGAGAAGG ACGCCAACGG CAAGGGCAAG
GACGTGCTGC TGTTCGTGGA CAACATTTAC CGCTACACGC TGGCCGGTAC CGAAGTGTCC
GCGCTGCTCG GCCGTATGCC GTCGGCCGTG GGTTACCAGC CCACTCTGGC CGAAGAAATG
GGCGTGCTGC AGGAACGCAT CACCTCGACC AAGAGCGGTT CGATCACCTC GATCCAGGCC
GTGTACGTGC CTGCGGACGA CCTGACCGAC CCGTCGCCGG CGACCACCTT CGCTCATTTG
GACTCGACCG TCACGCTGAG CCGTAACATC GCTTCGCTGG GTATCTACCC GGCTGTGGAT
CCGCTGGACT CCACCAGCCG CCAGATGGAC CCGCTGGTGA TCGGCCACGA GCATTACGAC
ACCGCCCAGC GCGTCCAGCA GACCTTGCAG AAGTACAAGG AACTGAAGGA CATCATCGCC
ATCCTGGGCA TGGACGAGCT GAGCGAAGAA GACAAGCAGT CGGTGTCGCG CGCACGCAAG
ATCGAGCGCT TCTTCAGCCA GCCCTTCCAC GTGGCCGAAG TGTTCACCGG CTCCCCGGGC
AAGTACGTCT CGCTGAAGGA CACCATCCGC GGCTTCAAGG CGATCTGCGA CGGCGAATAC
GACCACCTAC CGGAGCAGGC GTTCTACATG GTCGGCAGCA TCGAAGAAGC CGTCGAGAAA
GCCAACAAGA TGAGCGCCAA GGCGTAA
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| Protein sequence | MSQGKIVQII GAVVDVEFPR NEVPKVYHAL KVEGTEITLE VQQQLGDGVV RTIALGSTDG
LKRNLLATNT ERAISVPVGA GTLGRIMDVL GRPIDEAGDV QASDHWEIHR GAPSYEDQSS
STELLETGIK VIDLMCPFAK GGKVGLFGGA GVGKTVNMME LINNIAKAHS GLSVFAGVGE
RTREGNDFYH EMKDSNVLDK VAMVYGQMNE PPGNRLRVAL TGLTMAEYFR DEKDANGKGK
DVLLFVDNIY RYTLAGTEVS ALLGRMPSAV GYQPTLAEEM GVLQERITST KSGSITSIQA
VYVPADDLTD PSPATTFAHL DSTVTLSRNI ASLGIYPAVD PLDSTSRQMD PLVIGHEHYD
TAQRVQQTLQ KYKELKDIIA ILGMDELSEE DKQSVSRARK IERFFSQPFH VAEVFTGSPG
KYVSLKDTIR GFKAICDGEY DHLPEQAFYM VGSIEEAVEK ANKMSAKA
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