Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03097 |
Symbol | |
ID | 6308092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 4696801 |
End bp | 4697487 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642641818 |
Product | outer membrane protein |
Protein accession | YP_001915655 |
Protein GI | 188578726 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTCCA TTTCCATCCT GAGCCTGGCT GCTGTATCTG CACTTGCGAT TGCACCGTCC GCGTTCGCGC AGGACACCAC CTATACCGGC GACGCCTCCT CGACTTCTTC CAGCACGATG TCCAGCAACG GCGACACTGC TTCGGGGAAG CATTGGGCCG TGGTTGGCGG CGTGGCGCTG CTGAACCCCA AGAACAACCC GGCTCCGGGC CTGGACGTCG ATGGCGGCCC GGCACCGACG CTGAGCGCCA GCTACTACGT CAACGACAAC TGGGCCGTTG AATTGTGGGG CGCAGCCGAC AAGATCAACC ACCGCGTCAA CGCCGATGGC GTGGGCAAGG TCGGTACCGT CGATCAGCAG CCGATCGCCA TCAGCGGTCA GTACCACTTC GGCGAAGCCG ACAACGTGTT CCGTCCGTTC GTGGGCGTGG GCTACTACGA GTCGAACTTC AGCAACGAGA AGATCGATGC GGCGTCGACC AGCGGCGATC ACGTGGGTCT GAGCACCGCC AAGGGCGTCA TCGGCACCGC TGGTGTGGAC ATGAACATCA ACTCCACCTG GTTCGCACGT GCCGACGCCC GCTACATGCG TTCGCGTCCG GAACTGCGCG TGGCTGGCCA GGGCACCGGC AGCGAGCTGA AACTGGATCC GTGGACCGTT GGCTTCGGCA TCGGCGCGCG CTTCTAA
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Protein sequence | MRSISILSLA AVSALAIAPS AFAQDTTYTG DASSTSSSTM SSNGDTASGK HWAVVGGVAL LNPKNNPAPG LDVDGGPAPT LSASYYVNDN WAVELWGAAD KINHRVNADG VGKVGTVDQQ PIAISGQYHF GEADNVFRPF VGVGYYESNF SNEKIDAAST SGDHVGLSTA KGVIGTAGVD MNINSTWFAR ADARYMRSRP ELRVAGQGTG SELKLDPWTV GFGIGARF
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