| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03059 |
|---|
| Symbol | |
|---|
| ID | 6308127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 4731338 |
|---|
| End bp | 4733200 |
|---|
| Gene Length | 1863 bp |
|---|
| Protein Length | 620 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642641853 |
|---|
| Product | protease |
|---|
| Protein accession | YP_001915690 |
|---|
| Protein GI | 188578761 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGCCA CTGCCCCCTT CCAACTGCAT GCGGCCAACG ATCCGCTGGA ACAACGTGGT
CTGGTCGACA GCCCGGCGCC TGACGGCTCG CCCGCGGCCG GCAGGCTCAT CGTCAAATAC
AGGCCCAGCA TCGGCTCCGA CGCGCTGCGC GCGTCCATCC TGTCGTCGGC CGCACGCCGC
GCCAACCTGT TGCCTTCCTG CAGCAACGCC GCCCGTAGCG CGCCGATGGC CGCGCGCGTC
CTGCGCACCA CCGGCACCGG TGCCAGCGTG CTGCGCCTGA CCGGCCATCT GACTGCTGCC
GAGCAAACCA GGCTGCTGAC CGAACTGCGC GCCGACCCGG CCGTCGAATA CGCGCAATTG
GATCGGATGA TGCAGCCGGT GCTCGACCTG GTCGGGTCGG CCGCACTGCC GGCACAGGCG
CGTGCAACAG CGCAGCACAC CGATCCGGCA GTGCCCAACG ACAAGTTCTA CGCGAAATAT
CAATGGCATA TGCAGGACAG CGCGGGCGGG ATCCGCGCGC CCAAGGCCTG GGAGACCTCC
ACCGGCGGCG GCGTGGTGGT GGCGGTGATC GACACAGGCA TCCTGCCCGA CCACCCGGAT
CTGAAGAACA ACGACCACAT CCTGCAGGGC TACGACTTCA TCACCAACGC AAGTGTGTCC
CGTCGCACCA CCGACGGCCG CGTACCCGGC GCGCTCGACT ACGGCGATTG GATAGACGAC
GACAATACCT GCCTGCAGCG CGCGCGCGCC AGTAGCTGGC ACGGCACCCA CACGGCCGGC
ACGATCGGCG AACTGACCAA CAACGCGATT GGCGGCGTTG GCGCCGCACA CGACGCCCAG
ATCCTGCCGA TCCGCGCGCT CGGGCACTGC GGCGGCATGA GTTCGGATAT CGCCGATGCG
ATCGTGTGGG CATCGGGCGG GCACGTCGAT GGCGTGCCGG ACAATACCCA TCCGGCCGAA
GTGATCAACA TGAGTCTGAG CGGACCCGGC AGCTGCGACA GCAATACGCA GCAGGCGATC
AATACGGCCG TCGCCAACGG CAGCACGGTG GTGGTGGCCG CCGGCAACGA TGCCATCGAT
GCGGCGCAAT TCACCCCGGC CAGCTGCAGC AACGTGATCA CCGTGGGTGC CACCCGCATC
ACCGGCGGCA TCGCGTTCTA TTCCAACTTC GGCTCGGTCG TCGACCTGTC AGGACCCGGC
GGCGGCCAGG ACCAGGACAC CGGTAACGGC GGTTGGGACG GGTTGGTGCT GTCGACCGGC
TATAGCGGCA AGACCACGCC GACCTCCGGT CAATATAAGT ACCTCGGCTA TGCCGGCACC
TCGATGGCCT CGCCGCACGT CGCGGCCGTG GCTGCGTTGG TGCAAAGCGC GCTGGCGAGC
ACTGGCAAGA CACCGCTCAA CCCATCGCAA CTGCAGGCGG TCTTGAAACA GACCGCGCGC
GCCTTCCCGG TGCCACCGCC GACGGCGACA CCGATCGGTA CCGGCATCGT TGATGCGACG
GCGGCGATGG ACTATGTCCG CACCAATTGC AGCGGCAGCA GCTGCAAGCC GGTGAGCACC
GCACTGAGCA ACCGCACGCC GGTCACCGCG CAAAGTGCCG GCGTCGACGA GGAGCATTTG
TATAGCTTCA CCGCCACCGC GGGGACGCCG TTGAACGTGC TGTCCTACGG CGGCAGCGGC
AATGTCGCCC TGTACCTGAC GTTCGGCGCC GAGCCCACCA CCCGTAGCTA CGACCTGCGT
TCGGTCCGTC CCGGCAATAC GCAGACCCTG CGACTGCCCT CGCCACAGGC CGGCACCTAC
TTCATCAAGC TGGTCGGCGG AGACGGTGGT TTCAACAATG TGTCCTTGAT GGCCCGGCAG
TGA
|
|---|
| Protein sequence | MLATAPFQLH AANDPLEQRG LVDSPAPDGS PAAGRLIVKY RPSIGSDALR ASILSSAARR
ANLLPSCSNA ARSAPMAARV LRTTGTGASV LRLTGHLTAA EQTRLLTELR ADPAVEYAQL
DRMMQPVLDL VGSAALPAQA RATAQHTDPA VPNDKFYAKY QWHMQDSAGG IRAPKAWETS
TGGGVVVAVI DTGILPDHPD LKNNDHILQG YDFITNASVS RRTTDGRVPG ALDYGDWIDD
DNTCLQRARA SSWHGTHTAG TIGELTNNAI GGVGAAHDAQ ILPIRALGHC GGMSSDIADA
IVWASGGHVD GVPDNTHPAE VINMSLSGPG SCDSNTQQAI NTAVANGSTV VVAAGNDAID
AAQFTPASCS NVITVGATRI TGGIAFYSNF GSVVDLSGPG GGQDQDTGNG GWDGLVLSTG
YSGKTTPTSG QYKYLGYAGT SMASPHVAAV AALVQSALAS TGKTPLNPSQ LQAVLKQTAR
AFPVPPPTAT PIGTGIVDAT AAMDYVRTNC SGSSCKPVST ALSNRTPVTA QSAGVDEEHL
YSFTATAGTP LNVLSYGGSG NVALYLTFGA EPTTRSYDLR SVRPGNTQTL RLPSPQAGTY
FIKLVGGDGG FNNVSLMARQ
|
|---|
| |