| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03000 |
|---|
| Symbol | prmA |
|---|
| ID | 6308185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 4783093 |
|---|
| End bp | 4783998 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642641910 |
|---|
| Product | ribosomal protein L11 methyltransferase |
|---|
| Protein accession | YP_001915747 |
|---|
| Protein GI | 188578818 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2264] Ribosomal protein L11 methylase |
|---|
| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCCTGC CCCGTTTTCA GAATGCACTG GACGACGTCG GCGCAATGGC AGTGACCATG
CTCGACGCCA ATGCCGACAC CAGCAACGAG CGCGCCCTGC TCGAACCCGG CGTGGGCGAA
ATGCCGCTGT GGGACCGGCT GACCATGACC GCGCTGTTCG ATGGCGGCAG CGACGCGCTG
GTGGTGCTGG CGGCCCTGGA AGCCTTCGAT CCGGGCCTGG ACTGGAGCCA GGTGGGATTT
CGCATGGTCG AAGACAGCGA CTGGATCCGC GCCTGGATCG ACCTGTTCAA ATCGATGCAG
TTCGGCGCGC GCACTTTTAT CGTGCCGTGG AATCAAGACG TGCCTGAAGC TGCCAACGCC
CCGGACGCTG CCGTGGTGCG GCTGGATCCG GGCCTGGCCT TCGGTTCGGG CACGCATCAG
ACCACGGCGC TGTGCCTGCG CTGGCTGGAC AGCCTGGCCG TCAGCGGTGA GCTGCAAGGC
CGCAGCGTGC TCGATTTCGG CTGTGGCTCG GGCATTCTTG CGATCGCCGC GCTGAAGCTG
GGCGCCAGCC ACGCGGTCGG CGTGGACTAC GACCCGCAGG CGCTGCTGGC CACCGCCGAC
AACGCGCACC GCAACGCTCT GGAAGCGCAG CTGGCGGTGT ACATGCCGCA GGACGAGCCG
GTGCAGACCT ACCAGGTGGT GGTGGCCAAC ATCCTGGCCT CGGCACTGAG CACCCTGGCC
GACACCCTGG CTGCGCGCGT GGTCCCGGGC GGGCGGATTG CGCTGTCGGG CATCTTGCAC
GGCCAGGAAG ACGAATTGCT GGAACGTTAC GCCCCCTGGT TCGAACAACT GCGCTGCGAA
CGCGACGACG AATGGATGCG CATCGAAGGT GTGCGCCGCG CGGCATCCGG CACTCAGAAC
GGCTGA
|
|---|
| Protein sequence | MTLPRFQNAL DDVGAMAVTM LDANADTSNE RALLEPGVGE MPLWDRLTMT ALFDGGSDAL
VVLAALEAFD PGLDWSQVGF RMVEDSDWIR AWIDLFKSMQ FGARTFIVPW NQDVPEAANA
PDAAVVRLDP GLAFGSGTHQ TTALCLRWLD SLAVSGELQG RSVLDFGCGS GILAIAALKL
GASHAVGVDY DPQALLATAD NAHRNALEAQ LAVYMPQDEP VQTYQVVVAN ILASALSTLA
DTLAARVVPG GRIALSGILH GQEDELLERY APWFEQLRCE RDDEWMRIEG VRRAASGTQN
G
|
|---|
| |